jMHC: software assistant for multilocus genotyping of gene families using next-generation amplicon sequencing.
about
Early Duplication of a Single MHC IIB Locus Prior to the Passerine RadiationsMajor Histocompatibility Complex (MHC) markers in conservation biologyAMPLISAS: a web server for multilocus genotyping using next-generation amplicon sequencing data.New data from basal Australian songbird lineages show that complex structure of MHC class II β genes has early evolutionary origins within passerines.Positive selection on MHC class II DRB and DQB genes in the bank vole (Myodes glareolus).Stepwise threshold clustering: a new method for genotyping MHC loci using next-generation sequencing technology.Characterization and 454 pyrosequencing of major histocompatibility complex class I genes in the great tit reveal complexity in a passerine system.Evolution of major histocompatibility complex class I and class II genes in the brown bear.MHC genotyping of non-model organisms using next-generation sequencing: a new methodology to deal with artefacts and allelic dropout.From puffins to plankton: a DNA-based analysis of a seabird food chain in the northern Gulf of Maine.Patterns of evolution of MHC class II genes of crows (Corvus) suggest trans-species polymorphism.Variation in positively selected major histocompatibility complex class I loci in rufous-collared sparrows (Zonotrichia capensis).Effect of the enzyme and PCR conditions on the quality of high-throughput DNA sequencing resultsContrasting evolutionary histories of MHC class I and class II loci in grouse--effects of selection and gene conversionWithin-host competition between Borrelia afzelii ospC strains in wild hosts as revealed by massively parallel amplicon sequencingAdaptive major histocompatibility complex (MHC) and neutral genetic variation in two native Baltic Sea fishes (perch Perca fluviatilis and zander Sander lucioperca) with comparisons to an introduced and disease susceptible population in Australia (PNext-generation genotyping of hypervariable loci in many individuals of a non-model species: technical and theoretical implications.Egernia stokesii (gidgee skink) MHC I positively selected sites lack concordance with HLA peptide binding regions.Lack of Spatial Immunogenetic Structure among Wolverine (Gulo gulo) Populations Suggestive of Broad Scale Balancing Selection.MHC class II β exon 2 variation in pardalotes (Pardalotidae) is shaped by selection, recombination and gene conversion.Extensive variation at MHC DRB in the New Zealand sea lion (Phocarctos hookeri) provides evidence for balancing selection.Spatial patterns of immunogenetic and neutral variation underscore the conservation value of small, isolated American badger populationsA quantitative and qualitative comparison of illumina MiSeq and 454 amplicon sequencing for genotyping the highly polymorphic major histocompatibility complex (MHC) in a non-model species.Extreme MHC class I diversity in the sedge warbler (Acrocephalus schoenobaenus); selection patterns and allelic divergence suggest that different genes have different functions.Small-scale intraspecific patterns of adaptive immunogenetic polymorphisms and neutral variation in Lake Superior lake trout.Characteristics of MHC class I genes in house sparrows Passer domesticus as revealed by long cDNA transcripts and amplicon sequencing.The evolution of highly variable immunity genes across a passerine bird radiation.Major histocompatibility complex genes partly explain early survival in house sparrows.Characterization of MHC class II B polymorphism in multiple populations of wild gorillas using non-invasive samples and next-generation sequencing.MHC, parasites and antler development in red deer: no support for the Hamilton & Zuk hypothesis.Different ornaments signal male health and MHC variation in two populations of a warbler.Drift, selection, or migration? Processes affecting genetic differentiation and variation along a latitudinal gradient in an amphibian.Genes of the major histocompatibility complex highlight interactions of the innate and adaptive immune systemInterspecific hybridization increases MHC class II diversity in two sister species of newts.Ultra-deep Illumina sequencing accurately identifies MHC class IIb alleles and provides evidence for copy number variation in the guppy (Poecilia reticulata).MHC variation is related to a sexually selected ornament, survival, and parasite resistance in common yellowthroats.MHC diversity, malaria and lifetime reproductive success in collared flycatchers.Evaluation of two approaches to genotyping major histocompatibility complex class I in a passerine-CE-SSCP and 454 pyrosequencing.Effects of ovarian fluid and genetic differences on sperm performance and fertilization success of alternative reproductive tactics in Chinook salmon.Specific alleles at immune genes, rather than genome-wide heterozygosity, are related to immunity and survival in the critically endangered Attwater's prairie-chicken.
P2860
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P2860
jMHC: software assistant for multilocus genotyping of gene families using next-generation amplicon sequencing.
description
2011 nî lūn-bûn
@nan
2011 թուականի Փետրուարին հրատարակուած գիտական յօդուած
@hyw
2011 թվականի փետրվարին հրատարակված գիտական հոդված
@hy
2011年の論文
@ja
2011年論文
@yue
2011年論文
@zh-hant
2011年論文
@zh-hk
2011年論文
@zh-mo
2011年論文
@zh-tw
2011年论文
@wuu
name
jMHC: software assistant for m ...... eneration amplicon sequencing.
@ast
jMHC: software assistant for m ...... eneration amplicon sequencing.
@en
type
label
jMHC: software assistant for m ...... eneration amplicon sequencing.
@ast
jMHC: software assistant for m ...... eneration amplicon sequencing.
@en
prefLabel
jMHC: software assistant for m ...... eneration amplicon sequencing.
@ast
jMHC: software assistant for m ...... eneration amplicon sequencing.
@en
P2860
P1476
jMHC: software assistant for m ...... generation amplicon sequencing
@en
P2093
Michał T Stuglik
P2860
P304
P356
10.1111/J.1755-0998.2011.02997.X
P577
2011-02-28T00:00:00Z