Efficient algorithms for the reconciliation problem with gene duplication, horizontal transfer and loss.
about
Inferring horizontal gene transferComputational approaches to species phylogeny inference and gene tree reconciliationReconciliation and local gene tree rearrangement can be of mutual profitSupport measures to estimate the reliability of evolutionary events predicted by reconciliation methodsCophylogeny reconstruction via an approximate Bayesian computation.Genomic Data Quality Impacts Automated Detection of Lateral Gene Transfer in FungiPareto-optimal phylogenetic tree reconciliationGenomes in turmoil: quantification of genome dynamics in prokaryote supergenomes.Regulatory role of tetR gene in a novel gene cluster of Acidovorax avenae subsp. avenae RS-1 under oxidative stressA Bayesian method for analyzing lateral gene transfer.Supertrees Based on the Subtree Prune-and-Regraft Distance.The genome of Eimeria falciformis--reduction and specialization in a single host apicomplexan parasite.EUCALYPT: efficient tree reconciliation enumerator.Joint amalgamation of most parsimonious reconciled gene treesImproved gene tree error correction in the presence of horizontal gene transferConcatenated alignments and the case of the disappearing treeEvent inference in multidomain families with phylogenetic reconciliation.A fast method for calculating reliable event supports in tree reconciliations via Pareto optimalityEvolution of genes neighborhood within reconciled phylogenies: an ensemble approachProbabilistic inference of lateral gene transfer eventsDTL reconciliation repairReconciliation feasibility in the presence of gene duplication, loss, and coalescence with multiple individuals per species.HGTree: database of horizontally transferred genes determined by tree reconciliationLarge-scale multiple sequence alignment and tree estimation using SATé.Parsimonious inference of hybridization in the presence of incomplete lineage sorting.Reconciliation revisited: handling multiple optima when reconciling with duplication, transfer, and loss.Most parsimonious reconciliation in the presence of gene duplication, loss, and deep coalescence using labeled coalescent trees.On the computational complexity of the maximum parsimony reconciliation problem in the duplication-loss-coalescence model.Horizontal Gene Transfer and the History of Life.Inferring gene duplications, transfers and losses can be done in a discrete framework.Resolution and reconciliation of non-binary gene trees with transfers, duplications and losses.Detecting horizontal gene transfer by mapping sequencing reads across species boundaries.Towards sub-quadratic time and space complexity solutions for the dated tree reconciliation problem.ecceTERA: comprehensive gene tree-species tree reconciliation using parsimony.Function-related replacement of bacterial siderophore pathways.Toward a Metagenomic Understanding on the Bacterial Composition and Resistome in Hong Kong Banknotes.The Distant Siblings-A Phylogenomic Roadmap Illuminates the Origins of Extant Diversity in Fungal Aromatic Polyketide Biosynthesis.Biologically feasible gene trees, reconciliation maps and informative triples.DeCoSTAR: Reconstructing the Ancestral Organization of Genes or Genomes Using Reconciled Phylogenies.Isometric gene tree reconciliation revisited.
P2860
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P2860
Efficient algorithms for the reconciliation problem with gene duplication, horizontal transfer and loss.
description
2012 nî lūn-bûn
@nan
2012 թուականի Յունիսին հրատարակուած գիտական յօդուած
@hyw
2012 թվականի հունիսին հրատարակված գիտական հոդված
@hy
2012年の論文
@ja
2012年論文
@yue
2012年論文
@zh-hant
2012年論文
@zh-hk
2012年論文
@zh-mo
2012年論文
@zh-tw
2012年论文
@wuu
name
Efficient algorithms for the r ...... horizontal transfer and loss.
@ast
Efficient algorithms for the r ...... horizontal transfer and loss.
@en
Efficient algorithms for the r ...... horizontal transfer and loss.
@nl
type
label
Efficient algorithms for the r ...... horizontal transfer and loss.
@ast
Efficient algorithms for the r ...... horizontal transfer and loss.
@en
Efficient algorithms for the r ...... horizontal transfer and loss.
@nl
prefLabel
Efficient algorithms for the r ...... horizontal transfer and loss.
@ast
Efficient algorithms for the r ...... horizontal transfer and loss.
@en
Efficient algorithms for the r ...... horizontal transfer and loss.
@nl
P2860
P356
P1433
P1476
Efficient algorithms for the r ...... horizontal transfer and loss.
@en
P2093
Eric J Alm
Mukul S Bansal
P2860
P304
P356
10.1093/BIOINFORMATICS/BTS225
P407
P577
2012-06-01T00:00:00Z