FusionFinder: a software tool to identify expressed gene fusion candidates from RNA-Seq data.
about
Tandem RNA chimeras contribute to transcriptome diversity in human population and are associated with intronic genetic variantsIdentifying fusion transcripts using next generation sequencingNovel KAT6B-KANSL1 fusion gene identified by RNA sequencing in retroperitoneal leiomyoma with t(10;17)(q22;q21)The "grep" command but not FusionMap, FusionFinder or ChimeraScan captures the CIC-DUX4 fusion gene from whole transcriptome sequencing data on a small round cell tumor with t(4;19)(q35;q13)Comparison between karyotyping-FISH-reverse transcription PCR and RNA-sequencing-fusion gene identification programs in the detection of KAT6A-CREBBP in acute myeloid leukemiaSystematic chemical and molecular profiling of MLL-rearranged infant acute lymphoblastic leukemia reveals efficacy of romidepsinChimeric RNAs in cancer and normal physiology.Comparative assessment of methods for the fusion transcripts detection from RNA-Seq dataExploration of the gene fusion landscape of glioblastoma using transcriptome sequencing and copy number dataDiscovering and understanding oncogenic gene fusions through data intensive computational approachesAssessing the hodgepodge of non-mapped reads in bacterial transcriptomes: real or artifactual RNA chimeras?Is an observed non-co-linear RNA product spliced in trans, in cis or just in vitro?State of art fusion-finder algorithms are suitable to detect transcription-induced chimeras in normal tissues?Oncofuse: a computational framework for the prediction of the oncogenic potential of gene fusions.Fusion transcript discovery in formalin-fixed paraffin-embedded human breast cancer tissues reveals a link to tumor progression.Fusion genes with ALK as recurrent partner in ependymoma-like gliomas: a new brain tumor entity?Characterization of fusion genes and the significantly expressed fusion isoforms in breast cancer by hybrid sequencing.NCLscan: accurate identification of non-co-linear transcripts (fusion, trans-splicing and circular RNA) with a good balance between sensitivity and precisionIntegrative transcriptome sequencing identifies trans-splicing events with important roles in human embryonic stem cell pluripotency.Identification of cancer gene fusions based on advanced analysis of the human genome or transcriptome.Detecting and targetting oncogenic fusion proteins in the genomic era.Novel BRD4-NUT fusion isoforms increase the pathogenic complexity in NUT midline carcinoma.State-of-the-art fusion-finder algorithms sensitivity and specificity
P2860
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P2860
FusionFinder: a software tool to identify expressed gene fusion candidates from RNA-Seq data.
description
2012 nî lūn-bûn
@nan
2012 թուականի Յունիսին հրատարակուած գիտական յօդուած
@hyw
2012 թվականի հունիսին հրատարակված գիտական հոդված
@hy
2012年の論文
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2012年論文
@yue
2012年論文
@zh-hant
2012年論文
@zh-hk
2012年論文
@zh-mo
2012年論文
@zh-tw
2012年论文
@wuu
name
FusionFinder: a software tool ...... candidates from RNA-Seq data.
@ast
FusionFinder: a software tool ...... candidates from RNA-Seq data.
@en
FusionFinder: a software tool ...... candidates from RNA-Seq data.
@nl
type
label
FusionFinder: a software tool ...... candidates from RNA-Seq data.
@ast
FusionFinder: a software tool ...... candidates from RNA-Seq data.
@en
FusionFinder: a software tool ...... candidates from RNA-Seq data.
@nl
prefLabel
FusionFinder: a software tool ...... candidates from RNA-Seq data.
@ast
FusionFinder: a software tool ...... candidates from RNA-Seq data.
@en
FusionFinder: a software tool ...... candidates from RNA-Seq data.
@nl
P2860
P50
P1433
P1476
FusionFinder: a software tool ...... n candidates from RNA-Seq data
@en
P2093
Katherine Thompson-Wicking
Ursula R Kees
P2860
P304
P356
10.1371/JOURNAL.PONE.0039987
P407
P577
2012-06-27T00:00:00Z