Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing. - Wikidata - awgldk - TriplyDB

Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing.

Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing.

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Tracking Strains in the Microbiome: Insights from Metagenomics and Models Advances in DNA metabarcoding for food and wildlife forensic species identification The Road to Metagenomics: From Microbiology to DNA Sequencing Technologies and Bioinformatics High-throughput metagenomic technologies for complex microbial community analysis: open and closed formats Disturbance in the Mucosa-Associated Commensal Bacteria Is Associated with the Exacerbation of Chronic Colitis by Repeated Psychological Stress; Is That the New Target of Probiotics?Tiny microbes, enormous impacts: what matters in gut microbiome studies?Toward Accurate and Quantitative Comparative Metagenomics Variations in brain DNA Temporal Development of Gut Microbiota in Triclocarban Exposed Pregnant and Neonatal Rats Bacterial microbiome of breast milk and child saliva from low-income Mexican-American women and children Global Analysis of the Fungal Microbiome in Cystic Fibrosis Patients Reveals Loss of Function of the Transcriptional Repressor Nrg1 as a Mechanism of Pathogen Adaptation Ingestion of Milk Containing Very Low Concentration of Antimicrobials: Longitudinal Effect on Fecal Microbiota Composition in Preweaned Calves New multi-scale perspectives on the stromatolites of Shark Bay, Western Australia Associations between Ectomycorrhizal Fungi and Bacterial Needle Endophytes in Pinus radiata: Implications for Biotic Selection of Microbial Communities Oral Administration of Faecalibacterium prausnitzii Decreased the Incidence of Severe Diarrhea and Related Mortality Rate and Increased Weight Gain in Preweaned Dairy Heifers Influence of artifact removal on rare species recovery in natural complex communities using high-throughput sequencing Environmental fluctuations and host skin bacteria shift survival advantage between frogs and their fungal pathogen Associations among Wine Grape Microbiome, Metabolome, and Fermentation Behavior Suggest Microbial Contribution to Regional Wine Characteristics Parasitism perturbs the mucosal microbiome of Atlantic Salmon Bacterial community associated with the intestinal tract of Chinese mitten crab (Eriocheir sinensis) farmed in Lake Tai, China.Persistent gut microbiota immaturity in malnourished Bangladeshi children.DRISEE overestimates errors in metagenomic sequencing data.Dynamic changes in short- and long-term bacterial composition following fecal microbiota transplantation for recurrent Clostridium difficile infection.Development of a dual-index sequencing strategy and curation pipeline for analyzing amplicon sequence data on the MiSeq Illumina sequencing platform.Prevention, diagnosis and treatment of high-throughput sequencing data pathologies.Meta-QC-Chain: comprehensive and fast quality control method for metagenomic data.Assessment of quality control approaches for metagenomic data analysis Improved metagenome assemblies and taxonomic binning using long-read circular consensus sequence data A filtering method to generate high quality short reads using illumina paired-end technology Efficient and Accurate Multiple-Phenotype Regression Method for High Dimensional Data Considering Population Structure.Chronic warming stimulates growth of marsh grasses more than mangroves in a coastal wetland ecotone.Ectomycorrhizal fungal spore bank recovery after a severe forest fire: some like it hot Comparison of the vaginal microbial communities in women with recurrent genital HSV receiving acyclovir intravaginal rings.Synthetic spike-in standards for high-throughput 16S rRNA gene amplicon sequencing.Relationships between gut microbiota, plasma metabolites, and metabolic syndrome traits in the METSIM cohort.Biomonitoring of marine vertebrates in Monterey Bay using eDNA metabarcoding.Skin microbiota differs drastically between co-occurring frogs and newts Microbial profiles of a drinking water resource based on different 16S rRNA V regions during a heavy cyanobacterial bloom in Lake Taihu, China.The Bacteriophage EF-P29 Efficiently Protects against Lethal Vancomycin-Resistant Enterococcus faecalis and Alleviates Gut Microbiota Imbalance in a Murine Bacteremia Model.The Grapevine and Wine Microbiome: Insights from High-Throughput Amplicon Sequencing

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Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing.

http://www.wikidata.org/entity/Q34497700

description

2012 nî lūn-bûn

@nan

2012 թուականի Դեկտեմբերին հրատարակուած գիտական յօդուած

@hyw

2012 թվականի դեկտեմբերին հրատարակված գիտական հոդված

@hy

2012年の論文

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2012年論文

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2012年論文

@zh-hant

2012年論文

@zh-hk

2012年論文

@zh-mo

2012年論文

@zh-tw

2012年论文

@wuu

name

Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing.

@ast

Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing.

@en

Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing.

@nl

type

label

Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing.

@ast

Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing.

@en

Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing.

@nl

prefLabel

Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing.

@ast

Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing.

@en

Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing.

@nl

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Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing.

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David A Mills

http://www.w3.org/2001/XMLSchema#string

J Gregory Caporaso

http://www.w3.org/2001/XMLSchema#string

Jeremiah J Faith

http://www.w3.org/2001/XMLSchema#string

Nicholas A Bokulich

http://www.w3.org/2001/XMLSchema#string

Sathish Subramanian

http://www.w3.org/2001/XMLSchema#string

P2860

Human gut microbiome viewed across age and geography

QIIME allows analysis of high-throughput community sequencing data

Next-generation sequencing reveals significant bacterial diversity of botrytized wine

Brewhouse-resident microbiota are responsible for multi-stage fermentation of American coolship ale

Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB

Search and clustering orders of magnitude faster than BLAST

UniFrac: a new phylogenetic method for comparing microbial communities.

Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy

Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms

Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample.

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57-59

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10.1038/NMETH.2276

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1

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10

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Jeffrey I. Gordon

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2012-12-02T00:00:00Z

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1039195944

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23202435

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3531572

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