Genome-wide suppression of aberrant mRNA-like noncoding RNAs by NMD in Arabidopsis - Wikidata - awgldk - TriplyDB

Genome-wide suppression of aberrant mRNA-like noncoding RNAs by NMD in Arabidopsis

Genome-wide suppression of aberrant mRNA-like noncoding RNAs by NMD in Arabidopsis

http://www.wikidata.org/entity/Q37114917

about

Comprehensive transcriptome analysis reveals novel genes involved in cardiac glycoside biosynthesis and mlncRNAs associated with secondary metabolism and stress response in Digitalis purpurea Mechanism and regulation of the nonsense-mediated decay pathway Long noncoding RNA transcriptome of plants Nonsense-Mediated mRNA Decay: Degradation of Defective Transcripts Is Only Part of the Story Identification of pathways directly regulated by SHORT VEGETATIVE PHASE during vegetative and reproductive development in Arabidopsis.Genome-wide analysis of alternative splicing in Chlamydomonas reinhardtii.Genome-wide mapping of alternative splicing in Arabidopsis thaliana High-resolution profiling of NMD targets in yeast reveals translational fidelity as a basis for substrate selection.Expression of the eRF1 translation termination factor is controlled by an autoregulatory circuit involving readthrough and nonsense-mediated decay in plants.Analysis of antisense expression by whole genome tiling microarrays and siRNAs suggests mis-annotation of Arabidopsis orphan protein-coding genes.Genome-wide identification and characterization of long intergenic non-coding RNAs in Ganoderma lucidum.Translation of small open reading frames within unannotated RNA transcripts in Saccharomyces cerevisiae.Is there a classical nonsense-mediated decay pathway in trypanosomes?A role for nonsense-mediated mRNA decay in plants: pathogen responses are induced in Arabidopsis thaliana NMD mutants.Global effects of the small RNA biogenesis machinery on the Arabidopsis thaliana transcriptome.Plant nonsense-mediated mRNA decay is controlled by different autoregulatory circuits and can be induced by an EJC-like complex.Cell-type specific analysis of translating RNAs in developing flowers reveals new levels of control.Metastable differentially methylated regions within Arabidopsis inbred populations are associated with modified expression of non-coding transcripts Genome-wide analysis uncovers regulation of long intergenic noncoding RNAs in Arabidopsis.Genome-wide survey of cold stress regulated alternative splicing in Arabidopsis thaliana with tiling microarray Pervasive transcription of the eukaryotic genome: functional indices and conceptual implications.Analysis of RNA decay factor mediated RNA stability contributions on RNA abundance.Nonsense-mediated RNA decay--a switch and dial for regulating gene expression Altered antisense-to-sense transcript ratios in breast cancer Computational analysis of functional long noncoding RNAs reveals lack of peptide-coding capacity and parallels with 3' UTRs Alternative splicing and nonsense-mediated decay modulate expression of important regulatory genes in Arabidopsis.Genome-wide analysis of long noncoding RNA stability Surveillance of 3' Noncoding Transcripts Requires FIERY1 and XRN3 in Arabidopsis Deciphering the plant splicing code: experimental and computational approaches for predicting alternative splicing and splicing regulatory elements Aberrant growth and lethality of Arabidopsis deficient in nonsense-mediated RNA decay factors is caused by autoimmune-like response.Deciphering alternative splicing and nonsense-mediated decay modulate expression in primary lymphoid tissues of birds infected with avian pathogenic E. coli (APEC)The salicylic acid dependent and independent effects of NMD in plants.Identification of hundreds of novel UPF1 target transcripts by direct determination of whole transcriptome stability.Sugar is an endogenous cue for juvenile-to-adult phase transition in plants Cytoplasmic and nuclear quality control and turnover of single-stranded RNA modulate post-transcriptional gene silencing in plants.Accurate timekeeping is controlled by a cycling activator in Arabidopsis.Alternative splicing of transcription factors in plant responses to low temperature stress: mechanisms and functions.Cytoplasmic long noncoding RNAs are frequently bound to and degraded at ribosomes in human cells Translational Regulation of Cytoplasmic mRNAs OmicBrowse: a Flash-based high-performance graphics interface for genomic resources.

P2860

Q24599149-04875404-D1DA-422A-B4A7-2B880560250B Q26771669-CBC2E21B-8131-410C-A5BA-29E7C66781D1 Q28082013-8DC805EB-D1F5-42D3-B510-1BD7A82282AB Q28082699-E7EBE109-3984-4F37-B554-4BB81517A99F Q33355978-D25D42E3-3D79-4F24-B65C-5D39F6DC09C2 Q33531938-7C416857-191F-492F-B95A-A87D9612DEAF Q33560271-90965070-B5DA-4B93-972E-DB6FED6C0667 Q33569251-5CAADEB8-36E5-4E60-9CD5-E16C6886E8A6 Q33580482-3DF6DCDA-546B-4412-A628-2E6473B8A81A Q33592928-6D9DC93F-9AEA-4A6D-87E6-C315F92AF6D2 Q33763308-C272796F-0177-41D1-BF6A-2037AF0B3622 Q33926754-2A632624-93E7-486C-ABD5-6B7647EE16D0 Q34034768-93E38C68-931A-45DA-BD83-D1FEE24CFED2 Q34182070-59AAE626-4AFE-42FF-B9F6-0C3C73CB8BB0 Q34199829-62BE662D-5995-4944-BAD5-C4FF54E58106 Q34344228-AD55EB7A-4C81-47F9-9DB6-6AC263520A62 Q34344299-70AF9EA8-0BF1-4285-95DD-AC0F0740CEF1 Q34428457-322EE003-77FA-4467-B071-C5F4A2E7676F Q34470818-4AF5BF66-CF97-41D7-A9D9-003F9A90BB91 Q34776758-3BBC9C07-DEA0-4D60-99D5-BB9D2A2F3378 Q35004344-072B837F-47CB-48B2-BEB0-7D843A19EB57 Q35177862-6D64A9C5-0B97-47C2-B66F-B848628CDE73 Q35679722-447B1D87-76FA-4383-B74B-DC676FA5A765 Q35778988-FA849926-6029-46B6-901E-BFC97A27D7DF Q35853471-77B78507-0191-47DD-9E42-FF329D99684F Q35860653-052013A4-1B60-44A4-B4A4-701A520733BA Q35914857-CE673803-B671-42FD-AE64-D4E8E59E3305 Q35914979-0A168F10-3534-43A4-8B30-EA1ACDC4D89D Q35970681-B4D83743-0303-4F98-816F-C2C011338545 Q36061891-76043E26-07FF-4E74-A7CB-613A484F372B Q36299964-BA516222-B983-4FE3-A347-0AFE50639A4E Q36544756-BAB3D401-818B-4531-AA9A-2D70260411BC Q36684609-19BC60EC-BD3F-40EA-BD0B-9F42DFF773E8 Q36723063-53C22ABD-503F-4050-AAE3-19E86FDF5499 Q36783661-CD3B5C42-4AD8-4BB6-AA8E-217210758234 Q36804423-58791AA9-0DDE-4FAC-B292-8AE123DC5A5B Q36878244-B0BBBBCE-DF88-4C57-9312-3E8AAB26ED91 Q36931469-038EDAE5-8732-45E9-98D6-C3C0B1A7C434 Q37056064-2E919AD3-E3E9-480C-871C-56D3158C0A44 Q37245793-436AB081-BF02-4310-BE4E-0E217F8CC304

P2860

Genome-wide suppression of aberrant mRNA-like noncoding RNAs by NMD in Arabidopsis

http://www.wikidata.org/entity/Q37114917

description

article científic

@ca

article scientifique

@fr

articolo scientifico

@it

artigo científico

@pt

bilimsel makale

@tr

scientific article published on 30 January 2009

@en

vedecký článok

@sk

vetenskaplig artikel

@sv

videnskabelig artikel

@da

vědecký článek

@cs

name

Genome-wide suppression of aberrant mRNA-like noncoding RNAs by NMD in Arabidopsis

@en

Genome-wide suppression of aberrant mRNA-like noncoding RNAs by NMD in Arabidopsis.

@nl

type

label

Genome-wide suppression of aberrant mRNA-like noncoding RNAs by NMD in Arabidopsis

@en

Genome-wide suppression of aberrant mRNA-like noncoding RNAs by NMD in Arabidopsis.

@nl

prefLabel

Genome-wide suppression of aberrant mRNA-like noncoding RNAs by NMD in Arabidopsis

@en

Genome-wide suppression of aberrant mRNA-like noncoding RNAs by NMD in Arabidopsis.

@nl

P1433

Q37114917-02FA9B42-3E1A-46BB-814A-B86A626F7817

P1476

Q37114917-3E824F0A-3270-4B91-A34A-6D585893BF92

P2093

Q37114917-00D69103-D827-4596-BEC7-EEC082FB7C27

Q37114917-1AABA412-E79E-43D3-9C9C-903965D9B803

Q37114917-2E78E2D8-A5EE-497D-9938-F27EBEDC0BD3

Q37114917-3622AA9E-10C9-462D-8888-96CAED08DBA6

Q37114917-5972C279-B9A9-4959-8192-570ABB2251F6

Q37114917-6B62B448-CA62-463C-B680-E3A8120F18BB

Q37114917-86CE82D2-C710-4ACC-B17B-4E64D8E1380B

Q37114917-9DBA8166-A61D-4A25-BABC-0430B8CCF247

Q37114917-E11B998B-DB47-42F4-8BAB-7AF7EC23588B

Q37114917-EED60E9B-75E7-49D2-BBDF-DB43EE5FAAF9

P2860

Q37114917-02E4CC4B-F214-41A8-BF2A-FF20603184B0

Q37114917-03980B41-A220-4B88-A0E2-87433D428369

Q37114917-09F8B239-6DEF-484F-AB55-C6E4E64B69C5

Q37114917-1269CDA9-CB2C-44B4-82EE-264D265BA84F

Q37114917-2972D2FF-50DE-44A1-B571-B7D74E5A3222

Q37114917-348ACA42-D4CE-4986-99CA-63FA0B935E13

Q37114917-3F2F946A-A2F7-4BA7-AAF2-336F8D34715F

Q37114917-3FFDEDB4-7CDE-444A-AF93-021FA5786303

Q37114917-44CE3E22-C4D0-47DF-B0E8-DF737F21AEB9

Q37114917-55495A9B-971A-47A3-9512-8CF99757B61D

P304

Q37114917-89208747-1116-48D1-8C63-6EE8A7F0230E

P31

Q37114917-D2731B61-4E43-4F89-85E1-0BC751232E75

P356

Q37114917-8F06E963-F42C-4965-86A9-6347F224652B

P407

Q37114917-5F1C7AD2-D4CD-4B33-98E0-B816DBD2742B

P433

Q37114917-23DB4196-DB2D-4073-85CF-3951C33EBC56

P478

Q37114917-190294AA-52A2-43F3-AA1C-3D767204809E

P50

Q37114917-CF013D0E-E98D-444D-8163-3D475B116AAC

Q37114917-D03A0D1A-685C-4726-B5D1-B84338419E56

Q37114917-FB2E45B4-8ED8-45A7-AAFE-3D11D570E31F

P577

Q37114917-B915352B-3DA8-4008-A265-0D7141A347E6

P5875

Q37114917-077611C4-C932-4D52-8F44-2FCB6AB82B48

P698

Q37114917-7D5ED4A6-5CCF-4C93-9114-C3437E9EFCD1

P932

Q37114917-00B9E7E2-1AAB-4C21-9070-00C4D9E56FD1

P356

PNAS.0808902106

P1433

Proceedings of the National Academy of Sciences of the United States of America

P1476

Genome-wide suppression of aberrant mRNA-like noncoding RNAs by NMD in Arabidopsis

@en

P2093

Akihiro Matsushima

http://www.w3.org/2001/XMLSchema#string

Eli Kaminuma

http://www.w3.org/2001/XMLSchema#string

Junko Ishida

http://www.w3.org/2001/XMLSchema#string

Kousuke Hanada

http://www.w3.org/2001/XMLSchema#string

Maho Tanaka

http://www.w3.org/2001/XMLSchema#string

Makiko Kawashima

http://www.w3.org/2001/XMLSchema#string

Taeko Morosawa

http://www.w3.org/2001/XMLSchema#string

Tetsuro Toyoda

http://www.w3.org/2001/XMLSchema#string

Yoshiki Mochizuki

http://www.w3.org/2001/XMLSchema#string

Yukio Kurihara

http://www.w3.org/2001/XMLSchema#string

P2860

An NMD pathway in yeast involving accelerated deadenylation and exosome-mediated 3'-->5' degradation.

Empirical analysis of transcriptional activity in the Arabidopsis genome

Nonsense-mediated mRNA decay in mammalian cells involves decapping, deadenylating, and exonucleolytic activities

Dual roles of the nuclear cap-binding complex and SERRATE in pre-mRNA splicing and microRNA processing in Arabidopsis thaliana

Highly integrated single-base resolution maps of the epigenome in Arabidopsis

Nonsense-mediated mRNA decay: splicing, translation and mRNP dynamics

When the message goes awry: disease-producing mutations that influence mRNA content and performance.

Functional annotation of a full-length Arabidopsis cDNA collection.

Peptides encoded by short ORFs control development and define a new eukaryotic gene family

Nonsense surveillance regulates expression of diverse classes of mammalian transcripts and mutes genomic noise.

P304

2453-2458

http://www.w3.org/2001/XMLSchema#string

P31

scholarly article

P356

10.1073/PNAS.0808902106

http://www.w3.org/2001/XMLSchema#string

P407

P433

7

http://www.w3.org/2001/XMLSchema#string

P478

106

http://www.w3.org/2001/XMLSchema#string

P50

Kazuo Shinozaki

P577

2009-01-30T00:00:00Z

http://www.w3.org/2001/XMLSchema#dateTime

P5875

23963775

http://www.w3.org/2001/XMLSchema#string

P698

19181858

http://www.w3.org/2001/XMLSchema#string

P932

2650177

http://www.w3.org/2001/XMLSchema#string