Experimental discovery of sRNAs in Vibrio cholerae by direct cloning, 5S/tRNA depletion and parallel sequencing.
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A genome-wide survey of sRNAs in the symbiotic nitrogen-fixing alpha-proteobacterium Sinorhizobium melilotiA genome-wide approach to discovery of small RNAs involved in regulation of virulence in Vibrio choleraeComparative genomics reveals 104 candidate structured RNAs from bacteria, archaea, and their metagenomesIdentification of genes for small non-coding RNAs that belong to the regulon of the two-component regulatory system CiaRH in StreptococcusIdentification of novel non-coding small RNAs from Streptococcus pneumoniae TIGR4 using high-resolution genome tiling arraysDifferential RNA-seq of Vibrio cholerae identifies the VqmR small RNA as a regulator of biofilm formationIdentification of a chitin-induced small RNA that regulates translation of the tfoX gene, encoding a positive regulator of natural competence in Vibrio choleraeTranscriptome analysis of Pseudomonas syringae identifies new genes, noncoding RNAs, and antisense activityEvidence for a major role of antisense RNAs in cyanobacterial gene regulationYersinia pestis and Yersinia pseudotuberculosis infection: a regulatory RNA perspectiveSmall RNAs in the Vibrionaceae: an ocean still to be exploredAn integrated approach for finding overlooked genes in ShigellaGlobal discovery of small RNAs in Yersinia pseudotuberculosis identifies Yersinia-specific small, noncoding RNAs required for virulenceComputational analysis of bacterial RNA-Seq dataTranscriptomic profiling of the oyster pathogen Vibrio splendidus opens a window on the evolutionary dynamics of the small RNA repertoire in the Vibrio genusTranscriptome profile of a bovine respiratory disease pathogen: Mannheimia haemolytica PHL213RNA-seq based transcriptional map of bovine respiratory disease pathogen "Histophilus somni 2336"Biases in small RNA deep sequencing data.The highly conserved bacterial RNase YbeY is essential in Vibrio cholerae, playing a critical role in virulence, stress regulation, and RNA processingDeep RNA sequencing of L. monocytogenes reveals overlapping and extensive stationary phase and sigma B-dependent transcriptomes, including multiple highly transcribed noncoding RNAs.Deep sequencing-based discovery of the Chlamydia trachomatis transcriptome.A broadening world of bacterial small RNAs.Mining regulatory 5'UTRs from cDNA deep sequencing datasets.Genome-Wide Detection of Small Regulatory RNAs in Deep-Sea Bacterium Shewanella piezotolerans WP3The rocks and shallows of deep RNA sequencing: Examples in the Vibrio cholerae RNomeMultiple small RNAs identified in Mycobacterium bovis BCG are also expressed in Mycobacterium tuberculosis and Mycobacterium smegmatis.RNA-Seq-based monitoring of infection-linked changes in Vibrio cholerae gene expression.Deep sequencing reveals as-yet-undiscovered small RNAs in Escherichia coliAn antisense RNA that governs the expression kinetics of a multifunctional virulence gene.Structural and operational complexity of the Geobacter sulfurreducens genome.A novel antisense RNA regulates at transcriptional level the virulence gene icsA of Shigella flexneri.The Vibrio cholerae virulence regulatory cascade controls glucose uptake through activation of TarA, a small regulatory RNA.Comparative genome-wide analysis of small RNAs of major Gram-positive pathogens: from identification to applicationGenome-wide detection of novel regulatory RNAs in E. coliIdentification by cDNA cloning of abundant sRNAs in a human-avirulent Yersinia pestis strain grown under five different growth conditions.The Vibrio cholerae mannitol transporter is regulated posttranscriptionally by the MtlS small regulatory RNA.Genome-wide identification of novel small RNAs in Pseudomonas aeruginosa.Comparative profiling of Pseudomonas aeruginosa strains reveals differential expression of novel unique and conserved small RNAsNon-coding sRNAs regulate virulence in the bacterial pathogen Vibrio cholerae.Transposon insertion sequencing: a new tool for systems-level analysis of microorganisms.
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P2860
Experimental discovery of sRNAs in Vibrio cholerae by direct cloning, 5S/tRNA depletion and parallel sequencing.
description
article científic
@ca
article scientifique
@fr
articolo scientifico
@it
artigo científico
@pt
bilimsel makale
@tr
scientific article published on 17 February 2009
@en
vedecký článok
@sk
vetenskaplig artikel
@sv
videnskabelig artikel
@da
vědecký článek
@cs
name
Experimental discovery of sRNA ...... etion and parallel sequencing.
@en
Experimental discovery of sRNA ...... etion and parallel sequencing.
@nl
type
label
Experimental discovery of sRNA ...... etion and parallel sequencing.
@en
Experimental discovery of sRNA ...... etion and parallel sequencing.
@nl
prefLabel
Experimental discovery of sRNA ...... etion and parallel sequencing.
@en
Experimental discovery of sRNA ...... etion and parallel sequencing.
@nl
P2093
P2860
P356
P1476
Experimental discovery of sRNA ...... etion and parallel sequencing.
@en
P2093
Andrew Camilli
Jane M Liu
Jonathan Livny
Marc D Kimball
Matthew K Waldor
Michael S Lawrence
P2860
P356
10.1093/NAR/GKP080
P407
P577
2009-02-17T00:00:00Z