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Weakly positioned nucleosomes enhance the transcriptional competency of chromatinEvaluation of algorithm performance in ChIP-seq peak detectionThe Genomic HyperBrowser: inferential genomics at the sequence levelGenomic views of distant-acting enhancersThe epigenetic landscape of addictionDry and wet approaches for genome-wide functional annotation of conventional and unconventional transcriptional activatorsMolecular mechanisms of ETS transcription factor-mediated tumorigenesisExploring the effects of polymorphisms on cis-regulatory signal transduction responseDistinct global shifts in genomic binding profiles of limb malformation-associated HOXD13 mutationsEWS and FUS bind a subset of transcribed genes encoding proteins enriched in RNA regulatory functionsA biophysical model for analysis of transcription factor interaction and binding site arrangement from genome-wide binding dataIdentification of biologically relevant enhancers in human erythroid cells.A signal processing approach for enriched region detection in RNA polymerase II ChIP-seq data.Arpeggio: harmonic compression of ChIP-seq data reveals protein-chromatin interaction signatures.A comparative analysis of transcription factor binding models learned from PBM, HT-SELEX and ChIP data.CMT: a constrained multi-level thresholding approach for ChIP-Seq data analysis.MULTIPLE TESTING OF LOCAL MAXIMA FOR DETECTION OF PEAKS IN CHIP-SEQ DATA.Effects of short read quality and quantity on a de novo vertebrate transcriptome assemblyDNA-protein interactions: methods for detection and analysis.Extracting transcription factor targets from ChIP-Seq data.A practical comparison of methods for detecting transcription factor binding sites in ChIP-seq experimentsAn evolutionary consequence of dosage compensation on Drosophila melanogaster female X-chromatin structure?Q&A: ChIP-seq technologies and the study of gene regulationGenomic SELEX: a discovery tool for genomic aptamersHPeak: an HMM-based algorithm for defining read-enriched regions in ChIP-Seq data.Processing and analyzing ChIP-seq data: from short reads to regulatory interactions.Shape-based peak identification for ChIP-SeqIdentification of potential target genes for the tomato fruit-ripening regulator RIN by chromatin immunoprecipitation.Genomic imprinting-an epigenetic gene-regulatory model.A Method to Study the Epigenetic Chromatin States of Rare Hematopoietic Stem and Progenitor Cells; MiniChIP-Chip.Methods for cancer epigenome analysis.Monovalent and unpoised status of most genes in undifferentiated cell-enriched Drosophila testisEpigenomics of T cell activation, differentiation, and memory.A global clustering algorithm to identify long intergenic non-coding RNA--with applications in mouse macrophages.Comparison of four ChIP-Seq analytical algorithms using rice endosperm H3K27 trimethylation profiling data.Pol II and its associated epigenetic marks are present at Pol III-transcribed noncoding RNA genes.ChIP-Seq data analysis: identification of protein-DNA binding sites with SISSRs peak-finderEffector T cell plasticity: flexibility in the face of changing circumstancesDNA methylation of cancer genome.Linking cell signaling and the epigenetic machinery.
P2860
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P2860
description
article científic
@ca
article scientifique
@fr
articolo scientifico
@it
artigo científico
@pt
bilimsel makale
@tr
scientific article published on May 2009
@en
vedecký článok
@sk
vetenskaplig artikel
@sv
videnskabelig artikel
@da
vědecký článek
@cs
name
Genomic location analysis by ChIP-Seq.
@en
Genomic location analysis by ChIP-Seq.
@nl
type
label
Genomic location analysis by ChIP-Seq.
@en
Genomic location analysis by ChIP-Seq.
@nl
prefLabel
Genomic location analysis by ChIP-Seq.
@en
Genomic location analysis by ChIP-Seq.
@nl
P2860
P356
P1476
Genomic location analysis by ChIP-Seq.
@en
P2093
P2860
P356
10.1002/JCB.22077
P50
P577
2009-05-01T00:00:00Z