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Long-range pseudoknot interactions dictate the regulatory response in the tetrahydrofolate riboswitchStructural basis for recognition of S-adenosylhomocysteine by riboswitchesHighly modular structure and ligand binding by conformational capture in a minimalistic riboswitchFree State Conformational Sampling of the SAM-I Riboswitch Aptamer DomainMolecular sensing by the aptamer domain of the FMN riboswitch: a general model for ligand binding by conformational selectionInfluence of ground-state structure and Mg2+ binding on folding kinetics of the guanine-sensing riboswitch aptamer domainNucleotides Adjacent to the Ligand-Binding Pocket are Linked to Activity Tuning in the Purine RiboswitchA Disconnect between High-Affinity Binding and Efficient Regulation by Antifolates and Purines in the Tetrahydrofolate RiboswitchStructural determinants for ligand capture by a class II preQ 1 riboswitchProspects for riboswitch discovery and analysisMg2+Shifts Ligand-Mediated Folding of a Riboswitch from Induced-Fit to Conformational SelectionFolding and ligand recognition of the TPP riboswitch aptamer at single-molecule resolution.Multivector fluorescence analysis of the xpt guanine riboswitch aptamer domain and the conformational role of guanineThe ligand-free state of the TPP riboswitch: a partially folded RNA structure.Tuning riboswitch regulation through conformational selection.Comparative sequence and structure analysis reveals the conservation and diversity of nucleotide positions and their associated tertiary interactions in the riboswitches.Emerging structural themes in large RNA molecules.Kissing loop interaction in adenine riboswitch: insights from umbrella sampling simulationsA kissing loop is important for btuB riboswitch ligand sensing and regulatory control.Ligand-mediated and tertiary interactions cooperatively stabilize the P1 region in the guanine-sensing riboswitch.Characterizing RNA Excited States Using NMR Relaxation Dispersion.Carbonic anhydrase I (CA1) is involved in the process of bone formation and is susceptible to ankylosing spondylitis.High-throughput identification of promoters and screening of highly active promoter-5'-UTR DNA region with different characteristics from Bacillus thuringiensis.Single-molecule studies of the lysine riboswitch reveal effector-dependent conformational dynamics of the aptamer domain.Modularity of select riboswitch expression platforms enables facile engineering of novel genetic regulatory devices.Structure and mechanism of purine-binding riboswitches.Engineering modular 'ON' RNA switches using biological componentsRiboswitch structure in the ligand-free state.Ligand-induced stabilization of the aptamer terminal helix in the add adenine riboswitch.Role of ligand binding in structural organization of add A-riboswitch aptamer: a molecular dynamics simulation.Cooperative and directional folding of the preQ1 riboswitch aptamer domain.Quantitative and predictive model of kinetic regulation by E. coli TPP riboswitches.Non-specific binding of Na+ and Mg2+ to RNA determined by force spectroscopy methods.RNA Structural Modules Control the Rate and Pathway of RNA Folding and Assembly.Riboswitch structure and dynamics by smFRET microscopyModel-driven engineering of RNA devices to quantitatively program gene expression.Using RNA Sequence and Structure for the Prediction of Riboswitch Aptamer: A Comprehensive Review of Available Software and Tools.Cyclic di-GMP regulates TfoY in Vibrio cholerae to control motility by both transcriptional and posttranscriptional mechanisms.The regulation mechanism of yitJ and metF riboswitches.Hierarchical mechanism of amino acid sensing by the T-box riboswitch.
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description
article científic
@ca
article scientifique
@fr
articolo scientifico
@it
artigo científico
@pt
bilimsel makale
@tr
scientific article published on 09 July 2009
@en
vedecký článok
@sk
vetenskaplig artikel
@sv
videnskabelig artikel
@da
vědecký článek
@cs
name
A switch in time: detailing the life of a riboswitch
@en
A switch in time: detailing the life of a riboswitch.
@nl
type
label
A switch in time: detailing the life of a riboswitch
@en
A switch in time: detailing the life of a riboswitch.
@nl
prefLabel
A switch in time: detailing the life of a riboswitch
@en
A switch in time: detailing the life of a riboswitch.
@nl
P2860
P1476
A switch in time: detailing the life of a riboswitch
@en
P2093
Andrew D Garst
Robert T Batey
P2860
P304
P356
10.1016/J.BBAGRM.2009.06.004
P407
P577
2009-07-09T00:00:00Z