Parallel adaptive evolution cultures of Escherichia coli lead to convergent growth phenotypes with different gene expression states
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Deinococcus geothermalis: the pool of extreme radiation resistance genes shrinksGlobal reconstruction of the human metabolic network based on genomic and bibliomic dataMapping the environmental fitness landscape of a synthetic gene circuitUsing Genome-scale Models to Predict Biological CapabilitiesContext-specific metabolic networks are consistent with experimentsSpontaneous reaction silencing in metabolic optimizationCumulative number of cell divisions as a meaningful timescale for adaptive laboratory evolution of Escherichia coliDesign constraints on a synthetic metabolismEnsemble-based network aggregation improves the accuracy of gene network reconstructionGene expression in closely related species mirrors local adaptation: consequences for responses to a warming world.Quantifying organismal complexity using a population genetic approachEffect of Temperature on Fimbrial Gene Expression and Adherence of Enteroaggregative Escherichia coliPositive selection at high temperature reduces gene transcription in the bacteriophage ϕX174.Multiplex methods provide effective integration of multi-omic data in genome-scale models.Conservation of expression and sequence of metabolic genes is reflected by activity across metabolic statesChance and necessity in cellular response to challenge.Differential remodeling of a T-cell transcriptome following CD8- versus CD3-induced signaling.Understanding the adaptive growth strategy of Lactobacillus plantarum by in silico optimisationBeyond directed evolution: Darwinian selection as a tool for synthetic biology.Genotype networks in metabolic reaction spacesOptORF: Optimal metabolic and regulatory perturbations for metabolic engineering of microbial strains.Genomics of Parallel Experimental Evolution in DrosophilaHistorical contingency and the gradual evolution of metabolic properties in central carbon and genome-scale metabolisms.Omic data from evolved E. coli are consistent with computed optimal growth from genome-scale modelsTranscriptome analysis of parallel-evolved Escherichia coli strains under ethanol stress.Improved network performance via antagonism: From synthetic rescues to multi-drug combinations.Genetic basis of growth adaptation of Escherichia coli after deletion of pgi, a major metabolic geneAdaptive evolution of Escherichia coli K-12 MG1655 during growth on a Nonnative carbon source, L-1,2-propanediol.Environmental versatility promotes modularity in genome-scale metabolic networksEvolution of Escherichia coli to 42 °C and subsequent genetic engineering reveals adaptive mechanisms and novel mutations.Transition from positive to neutral in mutation fixation along with continuing rising fitness in thermal adaptive evolution.The global transcriptional regulatory network for metabolism in Escherichia coli exhibits few dominant functional states.RNA polymerase mutants found through adaptive evolution reprogram Escherichia coli for optimal growth in minimal mediaMultiscale modeling of metabolism and macromolecular synthesis in E. coli and its application to the evolution of codon usage.The effect of phenotypic plasticity on evolution in multipeaked fitness landscapes.Evolution of Escherichia coli rifampicin resistance in an antibiotic-free environment during thermal stressDispensability of Escherichia coli's latent pathways.Adaptive regulatory substitutions affect multiple stages in the life cycle of the bacteriophage φX174Selection affects genes involved in replication during long-term evolution in experimental populations of the bacteriophage φX174Evolution after introduction of a novel metabolic pathway consistently leads to restoration of wild-type physiology.
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P2860
Parallel adaptive evolution cultures of Escherichia coli lead to convergent growth phenotypes with different gene expression states
description
2005 nî lūn-bûn
@nan
2005年の論文
@ja
2005年論文
@yue
2005年論文
@zh-hant
2005年論文
@zh-hk
2005年論文
@zh-mo
2005年論文
@zh-tw
2005年论文
@wuu
2005年论文
@zh
2005年论文
@zh-cn
name
Parallel adaptive evolution cu ...... fferent gene expression states
@en
Parallel adaptive evolution cu ...... fferent gene expression states
@nl
type
label
Parallel adaptive evolution cu ...... fferent gene expression states
@en
Parallel adaptive evolution cu ...... fferent gene expression states
@nl
prefLabel
Parallel adaptive evolution cu ...... fferent gene expression states
@en
Parallel adaptive evolution cu ...... fferent gene expression states
@nl
P2860
P356
P1433
P1476
Parallel adaptive evolution cu ...... fferent gene expression states
@en
P2093
Andrew R Joyce
Stephen S Fong
P2860
P304
P356
10.1101/GR.3832305
P577
2005-10-01T00:00:00Z