A benchmark for Affymetrix GeneChip expression measures.
about
Algorithm-driven artifacts in median polish summarization of microarray dataStatistical analysis of an RNA titration series evaluates microarray precision and sensitivity on a whole-array basisCorrelation test to assess low-level processing of high-density oligonucleotide microarray dataConserved transcription factor binding sites of cancer markers derived from primary lung adenocarcinoma microarraysSequence dependence of cross-hybridization on short oligo microarrays.Comparison of seven methods for producing Affymetrix expression scores based on False Discovery Rates in disease profiling data"Harshlighting" small blemishes on microarrays.Evaluation of normalization methods for cDNA microarray data by k-NN classificationUse of a mixed tissue RNA design for performance assessments on multiple microarray formats.Evaluation of methods for oligonucleotide array data via quantitative real-time PCRComparison of normalization methods for CodeLink Bioarray data.Utilization of two sample t-test statistics from redundant probe sets to evaluate different probe set algorithms in GeneChip studies.Harshlight: a "corrective make-up" program for microarray chips.Statistical considerations for analysis of microarray experimentsComparative analysis of microarray normalization procedures: effects on reverse engineering gene networksAdaptation of a Bioinformatics Microarray Analysis Workflow for a Toxicogenomic Study in Rainbow TroutExpanding the understanding of biases in development of clinical-grade molecular signatures: a case study in acute respiratory viral infectionsIntensity-based hierarchical Bayes method improves testing for differentially expressed genes in microarray experimentsBGX: a Bioconductor package for the Bayesian integrated analysis of Affymetrix GeneChips.Quality assessment and data analysis for microRNA expression arrays.Validation and extension of an empirical Bayes method for SNP calling on Affymetrix microarrays.Using RNA sample titrations to assess microarray platform performance and normalization techniquesCorrection of spatial bias in oligonucleotide array data.Iterative rank-order normalization of gene expression microarray data.Comparison of gene expression microarray data with count-based RNA measurements informs microarray interpretation.A comprehensive sensitivity analysis of microarray breast cancer classification under feature variability.Response to Preprocessing of oligonucleotide array data.Empirical evaluation of data transformations and ranking statistics for microarray analysis.Evaluating methods for ranking differentially expressed genes applied to microArray quality control data.A new summarization method for Affymetrix probe level data.The effect of oligonucleotide microarray data pre-processing on the analysis of patient-cohort studies.How to decide? Different methods of calculating gene expression from short oligonucleotide array data will give different resultsA summarization approach for Affymetrix GeneChip data using a reference training set from a large, biologically diverse database.The Shivplot: a graphical display for trend elucidation and exploratory analysis of microarray dataPre-processing Agilent microarray data.t-Test at the Probe Level: An Alternative Method to Identify Statistically Significant Genes for Microarray Data.Correction of technical bias in clinical microarray data improves concordance with known biological information.Statistical issues in the analysis of Illumina data.A comprehensive re-analysis of the Golden Spike data: towards a benchmark for differential expression methods.A weighted average difference method for detecting differentially expressed genes from microarray data.
P2860
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P2860
A benchmark for Affymetrix GeneChip expression measures.
description
2004 nî lūn-bûn
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2004年の論文
@ja
2004年学术文章
@wuu
2004年学术文章
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2004年学术文章
@zh-cn
2004年学术文章
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2004年学术文章
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2004年学术文章
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name
A benchmark for Affymetrix GeneChip expression measures.
@en
A benchmark for Affymetrix GeneChip expression measures.
@nl
type
label
A benchmark for Affymetrix GeneChip expression measures.
@en
A benchmark for Affymetrix GeneChip expression measures.
@nl
prefLabel
A benchmark for Affymetrix GeneChip expression measures.
@en
A benchmark for Affymetrix GeneChip expression measures.
@nl
P2093
P356
P1433
P1476
A benchmark for Affymetrix GeneChip expression measures.
@en
P2093
Harris A Jaffee
Leslie M Cope
Rafael A Irizarry
P304
P356
10.1093/BIOINFORMATICS/BTG410
P407
P50
P577
2004-02-01T00:00:00Z