Dissecting the specificity of protein-protein interaction in bacterial two-component signaling: orphans and crosstalks
about
Direct-coupling analysis of residue coevolution captures native contacts across many protein familiesCorrelated electrostatic mutations provide a reservoir of stability in HIV proteaseConstructing sequence-dependent protein models using coevolutionary information.Emerging Computational Methods for the Rational Discovery of Allosteric Drugs.Fast and accurate multivariate Gaussian modeling of protein families: predicting residue contacts and protein-interaction partnersSimultaneous identification of specifically interacting paralogs and interprotein contacts by direct coupling analysis.New Techniques for Ancient Proteins: Direct Coupling Analysis Applied on Proteins Involved in Iron Sulfur Cluster BiogenesisGenes that influence swarming motility and biofilm formation in Variovorax paradoxus EPSImproving contact prediction along three dimensions.Transplantation of prokaryotic two-component signaling pathways into mammalian cells.Coevolutionary Landscape Inference and the Context-Dependence of Mutations in Beta-Lactamase TEM-1.Inter-Protein Sequence Co-Evolution Predicts Known Physical Interactions in Bacterial Ribosomes and the Trp OperonCoevolutionary analyses require phylogenetically deep alignments and better null models to accurately detect inter-protein contacts within and between species.Dimeric interactions and complex formation using direct coevolutionary couplings.The orphan response regulator EpsW is a substrate of the DifE kinase and it regulates exopolysaccharide in Myxococcus xanthus.Statistical analyses of protein sequence alignments identify structures and mechanisms in signal activation of sensor histidine kinasesA Combined Computational and Genetic Approach Uncovers Network Interactions of the Cyanobacterial Circadian ClockStrong cross-system interactions drive the activation of the QseB response regulator in the absence of its cognate sensor.Inferring interaction partners from protein sequences.The Two-Component System RsrS-RsrR Regulates the Tetrathionate Intermediate Pathway for Thiosulfate Oxidation in Acidithiobacillus caldus.Connecting the Sequence-Space of Bacterial Signaling Proteins to Phenotypes Using Coevolutionary Landscapes.The MprB extracytoplasmic domain negatively regulates activation of the Mycobacterium tuberculosis MprAB two-component system.Toward rationally redesigning bacterial two-component signaling systems using coevolutionary information.PPISEARCHENGINE: gene ontology-based search for protein-protein interactions.Molecular Mechanisms of Two-Component Signal Transduction.Identification of a U/Zn/Cu responsive global regulatory two-component system in Caulobacter crescentus.Direct coevolutionary couplings reflect biophysical residue interactions in proteins.Versatility and invariance in the evolution of homologous heteromeric interfaces.The two-component signal transduction system YvcPQ regulates the bacterial resistance to bacitracin in Bacillus thuringiensis.Inter-residue, inter-protein and inter-family coevolution: bridging the scales.Biomolecular coevolution and its applications: Going from structure prediction toward signaling, epistasis, and function.Sensory deprivation in Staphylococcus aureus.Cross talk in promoter recognition between six NarL-family response regulators of Escherichia coli two-component system.Flexibility and constraint: Evolutionary remodeling of the sporulation initiation pathway in FirmicutesDesigning bacterial signaling interactions with coevolutionary landscapes
P2860
Q24627074-EDADE5E2-4DB4-4FBC-BC79-667908652E00Q28483556-E1F4151A-736F-4B54-BCF3-745AD36A5511Q30009132-00FFFF74-68E2-4501-B5A8-B664055C45F0Q30358225-17076ACF-B085-4684-8968-3F40A3CF136AQ30360571-C699E0CA-3C74-4461-A111-FC02F7BEF8C3Q30394016-66C6309B-6EC1-41EB-B1A4-6AB01ED5AE90Q33799722-07FA821C-97C6-42CE-B68C-E673C1C99ED5Q34256800-54031668-2E08-462A-AD37-4937CC9AA79BQ34442613-AC620344-5304-44E6-B396-6227140CCB9DQ34480721-A94F7707-C8D9-4EDF-896D-0F2950FE92F1Q34497324-2E6849BC-F000-467E-A055-041CE2862202Q34514384-48DE6DFE-A07C-4D9E-8F14-61DDD8E0A4BDQ35754130-843708D5-9B32-491E-A7D1-83F0786B5D43Q36027358-C0339205-217F-439F-B6D0-D2AAF0818CFAQ36350340-1020732B-3B62-43AE-8D4E-67711D96341DQ36595197-35282B42-5CC1-471D-89EE-12984843F4B4Q37209220-52161FBF-F6FF-4D4D-BDA7-3CAF71EB904DQ37236417-29AA546F-91DF-4C09-8EC5-8FF1F74BA82DQ37379905-26739AEC-7427-4B6E-BCE3-D0717E9F53AAQ37389551-E682171A-83A9-42F3-8AED-0CAFD8CBA6D2Q37400436-202C66CD-B272-45A6-A477-CC199FB4CB4FQ37545991-FD8C9B53-44ED-48C4-B962-C05090284CC5Q37571220-99630F79-739D-4506-AAD9-629BD64B39C7Q38498476-5174F24B-52A5-4CC0-9F6A-737539046B74Q38926318-DFC00A28-01C5-4056-9BF8-F399823DCC40Q39051277-BFDB7B37-536D-40D7-820C-61840C21D702Q39204291-464A8CBC-97DF-42AC-AF03-C90D0879093BQ41911516-1F371301-E05C-415A-AC2A-992071E25D73Q46547185-E4F9E125-9F90-40DA-8BFC-002A1AC44AF9Q47442338-B45ED677-582C-495C-9399-177FE1BEA30AQ47621840-5006A60D-B30E-4276-A43F-FE9A3CD58B34Q48095741-900FC511-836A-4FF6-8534-C60F002C3630Q54267686-351D0074-05CA-47DA-9065-D2772410D574Q58744478-CC67A716-BD8C-4F95-908F-9A00A02F0818Q58765695-E7A430B4-E1F0-4662-A749-60B6DF7E02D5
P2860
Dissecting the specificity of protein-protein interaction in bacterial two-component signaling: orphans and crosstalks
description
2011 nî lūn-bûn
@nan
2011 թուականին հրատարակուած գիտական յօդուած
@hyw
2011 թվականին հրատարակված գիտական հոդված
@hy
2011年の論文
@ja
2011年論文
@yue
2011年論文
@zh-hant
2011年論文
@zh-hk
2011年論文
@zh-mo
2011年論文
@zh-tw
2011年论文
@wuu
name
Dissecting the specificity of ...... naling: orphans and crosstalks
@ast
Dissecting the specificity of ...... naling: orphans and crosstalks
@en
Dissecting the specificity of ...... naling: orphans and crosstalks
@en-gb
Dissecting the specificity of ...... naling: orphans and crosstalks
@nl
type
label
Dissecting the specificity of ...... naling: orphans and crosstalks
@ast
Dissecting the specificity of ...... naling: orphans and crosstalks
@en
Dissecting the specificity of ...... naling: orphans and crosstalks
@en-gb
Dissecting the specificity of ...... naling: orphans and crosstalks
@nl
prefLabel
Dissecting the specificity of ...... naling: orphans and crosstalks
@ast
Dissecting the specificity of ...... naling: orphans and crosstalks
@en
Dissecting the specificity of ...... naling: orphans and crosstalks
@en-gb
Dissecting the specificity of ...... naling: orphans and crosstalks
@nl
P2860
P50
P3181
P1433
P1476
Dissecting the specificity of ...... naling: orphans and crosstalks
@en
P2093
Andrea Procaccini
Hendrik Szurmant
P2860
P304
P3181
P356
10.1371/JOURNAL.PONE.0019729
P407
P577
2011-01-01T00:00:00Z