Variation in the strength of selected codon usage bias among bacteria - Test2 - elhamkhani - TriplyDB

Variation in the strength of selected codon usage bias among bacteria

Variation in the strength of selected codon usage bias among bacteria

http://www.wikidata.org/entity/Q24792094

about

The complete mitochondrial genome of the Antarctic springtail Cryptopygus antarcticus (Hexapoda: Collembola)Comparative genomic analysis of the genus Staphylococcus including Staphylococcus aureus and its newly described sister species Staphylococcus simiae Community-wide analysis of microbial genome sequence signatures Evidence of selection upon genomic GC-content in bacteria Coevolution of DNA uptake sequences and bacterial proteomes Comparison of correspondence analysis methods for synonymous codon usage in bacteria Analysis of Nanoarchaeum equitans genome and proteome composition: indications for hyperthermophilic and parasitic adaptation Correlation between sequence conservation and the genomic context after gene duplication.tRNA properties help shape codon pair preferences in open reading frames.Multiple roles of the coding sequence 5' end in gene expression regulation Analysis of amino acid and codon usage in Paramecium bursaria Good codons, bad transcript: large reductions in gene expression and fitness arising from synonymous mutations in a key enzyme Comparative genomics and the role of lateral gene transfer in the evolution of bovine adapted Streptococcus agalactiae Dietary nitrogen alters codon bias and genome composition in parasitic microorganisms Roles of solvent accessibility and gene expression in modeling protein sequence evolution Synthetic biology challenges long-held hypotheses in translation, codon bias and transcription.Genes optimized by evolution for accurate and fast translation encode in Archaea and Bacteria a broad and characteristic spectrum of protein functions.Genomic evidence for the emergence and evolution of pathogenicity and niche preferences in the genus Campylobacter.Analysis of Codon Usage Patterns in Herbaceous Peony (Paeonia lactiflora Pall.) Based on Transcriptome Data A problem in multivariate analysis of codon usage data and a possible solution.Analysis of codon usage patterns in Morus notabilis based on genome and transcriptome data.The action of selection on codon bias in the human genome is related to frequency, complexity, and chronology of amino acids Towards the identification of essential genes using targeted genome sequencing and comparative analysis.Rapid divergence of codon usage patterns within the rice genome.Prediction of highly expressed genes in microbes based on chromatin accessibility.Codon usage in twelve species of Drosophila.Analysis of the distribution of functionally relevant rare codons.Genomics of an extreme psychrophile, Psychromonas ingrahamii Stabilization of the genome of the mismatch repair deficient Mycobacterium tuberculosis by context-dependent codon choice.Genome Projector: zoomable genome map with multiple views Measure of synonymous codon usage diversity among genes in bacteria General rules for optimal codon choice.The systemic imprint of growth and its uses in ecological (meta)genomics.Why genes evolve faster on secondary chromosomes in bacteria Characterization of Toxoplasma gondii subtelomeric-like regions: identification of a long-range compositional bias that is also associated with gene-poor regions Developmental stage and level of codon usage bias in Drosophila Bacillus anthracis genome organization in light of whole transcriptome sequencing Mutation bias favors protein folding stability in the evolution of small populations Translational selection is ubiquitous in prokaryotes Estimates of the effect of natural selection on protein-coding content

P2860

Q21192736-1E0A5EDF-E4D3-4180-9FC7-C0D775F893AA Q21266701-20D4215D-70EF-42AE-BB58-2A9441729755 Q24490933-E6D6DA3E-9520-4476-92DC-45E56CAF15ED Q24502896-69779019-5D70-4441-AF9D-90D68B09D0C4 Q24652799-6AA635CA-DCB0-4242-BC0E-457D8B14441E Q24657604-9C9CCCB7-1BD9-4A7B-8A1A-4A265D68B8F0 Q24672111-A7BAB2E1-3DE7-49AF-BBE6-3C75FDE4CE53 Q24812494-553C1AAD-B405-4C95-A132-8EDB6AD4CCB3 Q25256741-E772162A-7A85-4CF0-ADE2-35A9F62EF95A Q27008936-D83B1D89-632B-40F1-B637-906E3293B34A Q28266981-DD59B093-6898-461A-9E51-D14C7847EF9B Q28709242-2F7D1664-4C7B-4EC7-93D8-3269AD8C080A Q28742416-8ECE8C00-8AE4-48E1-9779-5E5763714E57 Q28821402-02A6C62A-4D06-4645-8B70-19EC911CC91D Q30374802-82ADFA73-2E18-43CE-9019-060FB05ACCB1 Q30418054-CA7C87DE-1923-4CA3-BA13-73050FF999F4 Q30500184-8F227553-3DB3-4CCF-9DF6-0DE23B932D47 Q30847855-EEBF7A36-D0A6-4560-BF0D-105D096B4C06 Q31011877-B3327902-5FFD-4571-B691-39E5CAF7B938 Q31018808-C90B35FC-5CBB-4C4A-A0E0-5A5B73462FDC Q31160435-D6EB5B35-8C64-43A8-BE5C-463F3532DCCD Q33238491-9C96F03F-3CC2-40B1-B748-8C8A4D1ADECF Q33260930-B2C2AD55-08F2-49B1-94E4-45995F77BA8C Q33272848-5C2989B5-4802-425B-B7E7-69D0C1F801CE Q33273471-6E74B4A6-001F-4B4E-85F0-5D8568114DD8 Q33305695-9E5479DA-0932-41AF-AE9B-299416BF2915 Q33331793-D4920171-AE3D-42FB-851D-BE1D1046F6C7 Q33332035-8196B4D0-C229-412C-9D79-64D180247113 Q33338279-F0CCA03C-8F90-4C44-A9AD-E5EF7E709E9A Q33402657-2881F3FD-7C09-4FC4-B5EB-C854CDCB8882 Q33456271-ABF77922-5F47-43BC-8A30-DCA8F9E81AEA Q33480941-DA3DAFB2-1C8C-4553-B5D0-CD47537ABCB1 Q33525509-AB5A2B0A-44A4-4ADC-9867-CB64629A2D51 Q33549713-C2502AF5-F84D-492C-B65E-F4F8B8911E8F Q33559166-F4EDFB7F-08C2-44F8-8924-A6E9C8DD3F31 Q33567600-540A9E1B-965C-480E-BB46-4CD23FE76F11 Q33571056-BE7C9C83-C9E8-4F7F-88A8-7E23A40EE35E Q33576690-68653A8B-33E8-4F79-BDD7-1534C2843192 Q33619109-BEE947DA-1988-46F7-92D4-95C191B190CC Q33654627-1B690159-9AB8-4009-9572-5341F67F10E9

P2860

Variation in the strength of selected codon usage bias among bacteria

http://www.wikidata.org/entity/Q24792094

description

2005 nî lūn-bûn

@nan

2005 թուականին հրատարակուած գիտական յօդուած

@hyw

2005 թվականին հրատարակված գիտական հոդված

@hy

2005年の論文

@ja

2005年論文

@yue

2005年論文

@zh-hant

2005年論文

@zh-hk

2005年論文

@zh-mo

2005年論文

@zh-tw

2005年论文

@wuu

name

Variation in the strength of selected codon usage bias among bacteria

@ast

Variation in the strength of selected codon usage bias among bacteria

@en

Variation in the strength of selected codon usage bias among bacteria

@nl

type

label

Variation in the strength of selected codon usage bias among bacteria

@ast

Variation in the strength of selected codon usage bias among bacteria

@en

Variation in the strength of selected codon usage bias among bacteria

@nl

prefLabel

Variation in the strength of selected codon usage bias among bacteria

@ast

Variation in the strength of selected codon usage bias among bacteria

@en

Variation in the strength of selected codon usage bias among bacteria

@nl

P1433

Q24792094-D1A33F52-99E0-4AD8-82F3-ED7D893BBB51

P1476

Q24792094-B501DFEE-F884-411A-9D82-AA8EA4773BF5

P2093

Q24792094-77A20F8A-41D6-4C13-B4A3-D5B2DE43F2AA

Q24792094-7FC4C2C1-5852-4F05-96A7-399E63CAE36E

Q24792094-9B26044D-A5FB-4CBD-95EE-253B8F4A1A3F

Q24792094-AA9B1331-9304-4D42-BD7D-9D24AD1FFE88

P2860

Q24792094-03951CF4-C00A-46E7-8578-827BB0DE3F08

Q24792094-05962BCE-B6EC-4A1B-B93F-3A957401FD06

Q24792094-0C0C92A3-8D00-4DAD-996A-80C789226C7F

Q24792094-1123A822-DAE1-47E7-B072-0D8BB2E12ED3

Q24792094-17A48CEE-7359-42DC-BA7F-EB70C5A8E0D9

Q24792094-21A4C750-B4CD-47B6-8601-CF9B3ED0889A

Q24792094-2312B1CD-9504-4B00-A514-8775CD49FF2B

Q24792094-264484B7-BDF5-4CC7-A185-7304611335C8

Q24792094-27F43308-8F9F-4071-B04E-F77E06D5E67C

Q24792094-29D86F6A-AC40-4234-8392-D4B30186344D

P304

Q24792094-93056AA1-DA8E-4E32-B0EF-7D51905467A5

P31

Q24792094-B5C709CD-2413-4D06-9468-7E35F33267FF

P3181

Q24792094-BF8DFF10-BB11-4512-989D-9DF322AFE5CA

P356

Q24792094-5143D530-46C1-45E4-8AA8-577781F5A38F

P407

Q24792094-EB5D2356-1B0F-46D5-8285-9B20246B63CB

P433

Q24792094-6FCDDBEC-97F9-4661-9577-5369A7C3BD31

P478

Q24792094-526DC044-669D-42B6-9770-27602F65E616

P50

Q24792094-28357BB3-863D-456B-88A1-091D0DD963BA

P577

Q24792094-73D52BCE-68B8-46AC-9D52-23B619DF4687

P5875

Q24792094-74B16CDA-F458-4C3E-954D-B827BF420693

P698

Q24792094-5A8DBBBA-48CE-4083-B6CC-24129099E0C3

P921

Q24792094-BA08AB72-10D0-47C2-ABDA-530F04345D10

P932

Q24792094-FF323AF5-4C87-49B9-93B8-ADC76E93A169

P3181

P356

P1433

Nucleic Acids Research

P1476

Variation in the strength of selected codon usage bias among bacteria

@en

P2093

Elizabeth Bailes

http://www.w3.org/2001/XMLSchema#string

John F Peden

http://www.w3.org/2001/XMLSchema#string

R Elizabeth Sockett

http://www.w3.org/2001/XMLSchema#string

Russell J Grocock

http://www.w3.org/2001/XMLSchema#string

P2860

The genome sequence of the plant pathogen Xylella fastidiosa. The Xylella fastidiosa Consortium of the Organization for Nucleotide Sequencing and Analysis

Lateral gene transfer and the nature of bacterial innovation

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

Codon usage: mutational bias, translational selection, or both?

The 'effective number of codons' used in a gene

Codon selection in yeast

The codon Adaptation Index--a measure of directional synonymous codon usage bias, and its potential applications

Comparative analyses of the complete genome sequences of Pierce's disease and citrus variegated chlorosis strains of Xylella fastidiosa.

Proteome composition and codon usage in spirochaetes: species-specific and DNA strand-specific mutational biases

Solving the riddle of codon usage preferences: a test for translational selection

P304

1141-53

http://www.w3.org/2001/XMLSchema#string

P31

scholarly article

P3181

1499500

http://www.w3.org/2001/XMLSchema#string

P356

10.1093/NAR/GKI242

http://www.w3.org/2001/XMLSchema#string

P407

P433

4

http://www.w3.org/2001/XMLSchema#string

P478

33

http://www.w3.org/2001/XMLSchema#string

P50

Paul Martin Sharp

P577

2005-01-01T00:00:00Z

http://www.w3.org/2001/XMLSchema#dateTime

P5875

8004429

http://www.w3.org/2001/XMLSchema#string

P698

15728743

http://www.w3.org/2001/XMLSchema#string

P921

P932

549432

http://www.w3.org/2001/XMLSchema#string