Reconstitution of archaeal H/ACA small ribonucleoprotein complexes active in pseudouridylation - Test2 - elhamkhani - TriplyDB

Reconstitution of archaeal H/ACA small ribonucleoprotein complexes active in pseudouridylation

Reconstitution of archaeal H/ACA small ribonucleoprotein complexes active in pseudouridylation

http://www.wikidata.org/entity/Q24810243

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An improved definition of the RNA-binding specificity of SECIS-binding protein 2, an essential component of the selenocysteine incorporation machinery hNaf1 is required for accumulation of human box H/ACA snoRNPs, scaRNPs, and telomerase SHQ1 is required prior to NAF1 for assembly of H/ACA small nucleolar and telomerase RNPs Stepwise RNP assembly at the site of H/ACA RNA transcription in human cells A computational screen for mammalian pseudouridylation guide H/ACA RNAs 2'-O-methylation of the wobble residue of elongator pre-tRNA(Met) in Haloferax volcanii is guided by a box C/D RNA containing unique features The K-loop, a general feature of the Pyrococcus C/D guide RNAs, is an RNA structural motif related to the K-turn.A novel experimental approach for systematic identification of box H/ACA snoRNAs from eukaryotes Crystal structure determination and site-directed mutagenesis of the Pyrococcus abyssi aCBF5-aNOP10 complex reveal crucial roles of the C-terminal domains of both proteins in H/ACA sRNP activity.H/ACA small nucleolar RNA pseudouridylation pockets bind substrate RNA to form three-way junctions that position the target U for modification Structure and Functional Studies of the CS Domain of the Essential H/ACA Ribonucleoparticle Assembly Protein SHQ1 Structure of a functional ribonucleoprotein pseudouridine synthase bound to a substrate RNA Functional and Structural Impact of Target Uridine Substitutions on the H/ACA Ribonucleoprotein Particle Pseudouridine Synthase,Glycosidic Bond Conformation Preference Plays a Pivotal Role in Catalysis of RNA Pseudouridylation: A Combined Simulation and Structural Study Structural and functional evidence of high specificity of Cbf5 for ACA trinucleotide Structure of H/ACA RNP Protein Nhp2p Reveals Cis/Trans Isomerization of a Conserved Proline at the RNA and Nop10 Binding Interface Reconstitution and structural analysis of the yeast box H/ACA RNA-guided pseudouridine synthase Structure of the Shq1-Cbf5-Nop10-Gar1 complex and implications for H/ACA RNP biogenesis and dyskeratosis congenita Characterization of the interaction between protein Snu13p/15.5K and the Rsa1p/NUFIP factor and demonstration of its functional importance for snoRNP assembly Different mechanisms for pseudouridine formation in yeast 5S and 5.8S rRNAs.Analysis of sequence and structural features that identify the B/C motif of U3 small nucleolar RNA as the recognition site for the Snu13p-Rrp9p protein pair Structure-function relationships of archaeal Cbf5 during in vivo RNA-guided pseudouridylation.Gain and loss of an intron in a protein-coding gene in Archaea: the case of an archaeal RNA pseudouridine synthase gene.The box H/ACA ribonucleoprotein complex: interplay of RNA and protein structures in post-transcriptional RNA modification.Ribosomal protein L7Ae is a subunit of archaeal RNase P.A flexible RNA backbone within the polypyrimidine tract is required for U2AF65 binding and pre-mRNA splicing in vivo Structural study of the H/ACA snoRNP components Nop10p and the 3' hairpin of U65 snoRNA.The L7Ae protein binds to two kink-turns in the Pyrococcus furiosus RNase P RNA.Comparative study of two box H/ACA ribonucleoprotein pseudouridine-synthases: relation between conformational dynamics of the guide RNA, enzyme assembly and activity.Formation of the conserved pseudouridine at position 55 in archaeal tRNA Pseudouridine formation in archaeal RNAs: The case of Haloferax volcanii.Contribution of two conserved histidines to the dual activity of archaeal RNA guide-dependent and -independent pseudouridine synthase Cbf5.The structure and function of small nucleolar ribonucleoproteins.Accurate placement of substrate RNA by Gar1 in H/ACA RNA-guided pseudouridylation.Identification of determinants in the protein partners aCBF5 and aNOP10 necessary for the tRNA:Psi55-synthase and RNA-guided RNA:Psi-synthase activities.RNA-guided isomerization of uridine to pseudouridine--pseudouridylation.Pseudouridine: still mysterious, but never a fake (uridine)!Kinetic and thermodynamic characterization of the reaction pathway of box H/ACA RNA-guided pseudouridine formation.How a single protein complex accommodates many different H/ACA RNAs.Combined in silico and experimental identification of the Pyrococcus abyssi H/ACA sRNAs and their target sites in ribosomal RNAs

P2860

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P2860

Reconstitution of archaeal H/ACA small ribonucleoprotein complexes active in pseudouridylation

http://www.wikidata.org/entity/Q24810243

description

2005 nî lūn-bûn

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2005 թուականի Յունիսին հրատարակուած գիտական յօդուած

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2005 թվականի հունիսին հրատարակված գիտական հոդված

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2005年の論文

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2005年論文

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2005年論文

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2005年論文

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2005年論文

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2005年論文

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2005年论文

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name

Reconstitution of archaeal H/A ...... es active in pseudouridylation

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Reconstitution of archaeal H/A ...... es active in pseudouridylation

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Reconstitution of archaeal H/A ...... es active in pseudouridylation

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type

label

Reconstitution of archaeal H/A ...... es active in pseudouridylation

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Reconstitution of archaeal H/A ...... es active in pseudouridylation

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Reconstitution of archaeal H/A ...... es active in pseudouridylation

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Reconstitution of archaeal H/A ...... es active in pseudouridylation

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Reconstitution of archaeal H/A ...... es active in pseudouridylation

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Reconstitution of archaeal H/A ...... es active in pseudouridylation

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P1433

Nucleic Acids Research

P1476

Reconstitution of archaeal H/A ...... es active in pseudouridylation

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P2093

Bruno Charpentier

http://www.w3.org/2001/XMLSchema#string

Christiane Branlant

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Sébastien Muller

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P2860

Nhp2p and Nop10p are essential for the function of H/ACA snoRNPs

Dyskerin localizes to the nucleolus and its mislocalization is unlikely to play a role in the pathogenesis of dyskeratosis congenita

The family of box ACA small nucleolar RNAs is defined by an evolutionarily conserved secondary structure and ubiquitous sequence elements essential for RNA accumulation

In vitro assembly of human H/ACA small nucleolar RNPs reveals unique features of U17 and telomerase RNAs

A common core RNP structure shared between the small nucleoar box C/D RNPs and the spliceosomal U4 snRNP

Identification of 86 candidates for small non-messenger RNAs from the archaeon Archaeoglobus fulgidus.

Sequence and structural elements of methylation guide snoRNAs essential for site-specific ribose methylation of pre-rRNA.

Immunopurified small nucleolar ribonucleoprotein particles pseudouridylate rRNA independently of their association with phosphorylated Nopp140.

Binding of L7Ae protein to the K-turn of archaeal snoRNAs: a shared RNA binding motif for C/D and H/ACA box snoRNAs in Archaea

Human H/ACA small nucleolar RNPs and telomerase share evolutionarily conserved proteins NHP2 and NOP10

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3133-3144

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scholarly article

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10.1093/NAR/GKI630

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10

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33

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Christiane Branlant

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2005-06-02T00:00:00Z

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7809402

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15933208

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ribonucleoprotein

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1142404

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