SciClone: inferring clonal architecture and tracking the spatial and temporal patterns of tumor evolution - Test2 - elhamkhani - TriplyDB

SciClone: inferring clonal architecture and tracking the spatial and temporal patterns of tumor evolution

SciClone: inferring clonal architecture and tracking the spatial and temporal patterns of tumor evolution

http://www.wikidata.org/entity/Q27321859

about

Cancer classification in the genomic era: five contemporary problems Cancer evolution: mathematical models and computational inference Trans-ethnic meta-analysis identifies common and rare variants associated with hepatocyte growth factor levels in the Multi-Ethnic Study of Atherosclerosis (MESA).Integrated Multiregional Analysis Proposing a New Model of Colorectal Cancer Evolution Impact of mutational profiles on response of primary oestrogen receptor-positive breast cancers to oestrogen deprivation A combinatorial approach for analyzing intra-tumor heterogeneity from high-throughput sequencing data.Reconstruction of clonal trees and tumor composition from multi-sample sequencing data.densityCut: an efficient and versatile topological approach for automatic clustering of biological data Use of application containers and workflows for genomic data analysis.eTumorType, An Algorithm of Discriminating Cancer Types for Circulating Tumor Cells or Cell-free DNAs in Blood.Circulating mutational portrait of cancer: manifestation of aggressive clonal events in both early and late stages.Multilevel genomics of colorectal cancers with microsatellite instability-clinical impact of JAK1 mutations and consensus molecular subtype 1 Clonal architecture of secondary acute myeloid leukemia defined by single-cell sequencing.Towards accurate characterization of clonal heterogeneity based on structural variation Assessing intratumor heterogeneity and tracking longitudinal and spatial clonal evolutionary history by next-generation sequencing.Predictors of Chemosensitivity in Triple Negative Breast Cancer: An Integrated Genomic Analysis.Mutational landscape of gastric adenocarcinoma in Chinese: implications for prognosis and therapy.Ploidy-Seq: inferring mutational chronology by sequencing polyploid tumor subpopulations Whole-genome and multisector exome sequencing of primary and post-treatment glioblastoma reveals patterns of tumor evolution Computational methods and resources for the interpretation of genomic variants in cancer Enhancing cancer clonality analysis with integrative genomics.SubClonal Hierarchy Inference from Somatic Mutations: Automatic Reconstruction of Cancer Evolutionary Trees from Multi-region Next Generation Sequencing.SomVarIUS: somatic variant identification from unpaired tissue samples.Optimizing cancer genome sequencing and analysis.The Clinical Significance and Molecular Features of the Spatial Tumor Shapes in Breast Cancers Visualizing tumor evolution with the fishplot package for R Tumor Evolution in Two Patients with Basal-like Breast Cancer: A Retrospective Genomics Study of Multiple Metastases Profiling of somatic mutations in acute myeloid leukemia with FLT3-ITD at diagnosis and relapse.Genome-wide mutation profiles of colorectal tumors and associated liver metastases at the exome and transcriptome levels.phyC: Clustering cancer evolutionary trees.Intra-tumor genetic heterogeneity in rectal cancer Whole-exome sequencing in relapsing chronic lymphocytic leukemia: clinical impact of recurrent RPS15 mutations Early and multiple origins of metastatic lineages within primary tumors Longitudinal copy number, whole exome and targeted deep sequencing of 'good risk' IGHV-mutated CLL patients with progressive disease Genetic alterations and their clinical implications in gastric cancer peritoneal carcinomatosis revealed by whole-exome sequencing of malignant ascites JAK-STAT and G-protein-coupled receptor signaling pathways are frequently altered in epitheliotropic intestinal T-cell lymphoma.Distinct evolution and dynamics of epigenetic and genetic heterogeneity in acute myeloid leukemia.Algorithmic methods to infer the evolutionary trajectories in cancer progression.Allele-Specific Quantification of Structural Variations in Cancer Genomes.Comprehensive mutational analysis of primary and relapse acute promyelocytic leukemia.

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SciClone: inferring clonal architecture and tracking the spatial and temporal patterns of tumor evolution

http://www.wikidata.org/entity/Q27321859

description

2014 nî lūn-bûn

@nan

2014 թուականի Օգոստոսին հրատարակուած գիտական յօդուած

@hyw

2014 թվականի օգոստոսին հրատարակված գիտական հոդված

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2014年の論文

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2014年論文

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2014年論文

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2014年論文

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2014年論文

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2014年論文

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2014年论文

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name

SciClone: inferring clonal arc ...... al patterns of tumor evolution

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SciClone: inferring clonal arc ...... al patterns of tumor evolution

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SciClone: inferring clonal arc ...... al patterns of tumor evolution

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SciClone: inferring clonal arc ...... al patterns of tumor evolution

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SciClone: inferring clonal arc ...... al patterns of tumor evolution

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SciClone: inferring clonal arc ...... al patterns of tumor evolution

@nl

prefLabel

SciClone: inferring clonal arc ...... al patterns of tumor evolution

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SciClone: inferring clonal arc ...... al patterns of tumor evolution

@en

SciClone: inferring clonal arc ...... al patterns of tumor evolution

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JOURNAL.PCBI.1003665

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PLOS Computational Biology

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SciClone: inferring clonal arc ...... al patterns of tumor evolution

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Brian S White

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Christopher A Miller

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John F DiPersio

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John S Welch

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Li Ding

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Malachi Griffith

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Matthew J Walter

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Michael H Tomasson

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Nathan D Dees

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The common feature of leukemia-associated IDH1 and IDH2 mutations is a neomorphic enzyme activity converting alpha-ketoglutarate to 2-hydroxyglutarate

Distant metastasis occurs late during the genetic evolution of pancreatic cancer

VarScan 2: somatic mutation and copy number alteration discovery in cancer by exome sequencing

Comprehensive molecular portraits of human breast tumours

Recurring mutations found by sequencing an acute myeloid leukemia genome

Macrostate data clustering

Targeted inhibition of mutant IDH2 in leukemia cells induces cellular differentiation

Intratumor Heterogeneity and Branched Evolution Revealed by Multiregion Sequencing

The clonal evolution of tumor cell populations

Integrated genomic characterization of endometrial carcinoma

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e1003665

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scholarly article

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37872

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10.1371/JOURNAL.PCBI.1003665

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Timothy A. Graubert

William Schierding

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2014-08-01T00:00:00Z

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264634321

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