Overall structure and sugar dynamics of a DNA dodecamer from homo- and heteronuclear dipolar couplings and 31P chemical shift anisotropy
about
Genomic regions flanking E-box binding sites influence DNA binding specificity of bHLH transcription factors through DNA shapePre-organized structure of viral DNA at the binding-processing site of HIV-1 integrasePhysicochemical Properties of Ion Pairs of Biological MacromoleculesAssessing the Current State of Amber Force Field Modifications for DNAFree energy landscape and transition pathways from Watson-Crick to Hoogsteen base pairing in free duplex DNALiquid-crystal NMR structure of HIV TAR RNA bound to its SELEX RNA aptamer reveals the origins of the high stability of the complexSolution Structure of the Dickerson DNA Dodecamer Containing a Single RibonucleotideUsing small angle solution scattering data in Xplor-NIH structure calculationsThe intrinsic mechanics of B-DNA in solution characterized by NMRDirect observation of dipolar couplings between distant protons in weakly aligned nucleic acidsDNA structures from phosphate chemical shifts.Intrinsic flexibility of B-DNA: the experimental TRX scale.Structure, Stiffness and Substates of the Dickerson-Drew Dodecamer.Oxetane locked thymidine in the Dickerson-Drew dodecamer causes local base pairing distortions -- an NMR structure and hydration study.A systematic molecular dynamics study of nearest-neighbor effects on base pair and base pair step conformations and fluctuations in B-DNA.Insights into Watson-Crick/Hoogsteen breathing dynamics and damage repair from the solution structure and dynamic ensemble of DNA duplexes containing m1A.Changes in DNA bending induced by restricting nucleotide ring pucker studied by weak alignment NMR spectroscopyMeasurement of imino 1H-1H residual dipolar couplings in RNA.A measure of bending in nucleic acids structures applied to A-tract DNA.Molecular dynamics simulations of the 136 unique tetranucleotide sequences of DNA oligonucleotides. II: sequence context effects on the dynamical structures of the 10 unique dinucleotide steps.cgDNA: a software package for the prediction of sequence-dependent coarse-grain free energies of B-form DNADeriving quantitative dynamics information for proteins and RNAs using ROTDIF with a graphical user interface.Cheminformatics methods for novel nanopore analysis of HIV DNA terminiSequence-dependent gating of an ion channel by DNA hairpin molecules.Defective removal of ribonucleotides from DNA promotes systemic autoimmunity.A map of minor groove shape and electrostatic potential from hydroxyl radical cleavage patterns of DNA.Structural features of DNA that determine RNA polymerase II core promoter.NMR methods for studying the structure and dynamics of RNA.Parmbsc1: a refined force field for DNA simulations.Quantitative analysis of monovalent counterion binding to random-sequence, double-stranded DNA using the replacement ion method.Protein backbone motions viewed by intraresidue and sequential HN-Halpha residual dipolar couplingsDNA A-tracts are not curved in solutions containing high concentrations of monovalent cations.Nuance in the double-helix and its role in protein-DNA recognition.Ion motions in molecular dynamics simulations on DNA.Cytosine ribose flexibility in DNA: a combined NMR 13C spin relaxation and molecular dynamics simulation study.Balancing the interactions of ions, water, and DNA in the Drude polarizable force field.All-atom polarizable force field for DNA based on the classical Drude oscillator modelDNA bending induced by carbocyclic sugar analogs constrained to the north conformation.Long-timescale dynamics of the Drew-Dickerson dodecamer.Preparation of selective and segmentally labeled single-stranded DNA for NMR by self-primed PCR and asymmetrical endonuclease double digestion.
P2860
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P2860
Overall structure and sugar dynamics of a DNA dodecamer from homo- and heteronuclear dipolar couplings and 31P chemical shift anisotropy
description
2003 nî lūn-bûn
@nan
2003 թուականի Օգոստոսին հրատարակուած գիտական յօդուած
@hyw
2003 թվականի օգոստոսին հրատարակված գիտական հոդված
@hy
2003年の論文
@ja
2003年論文
@yue
2003年論文
@zh-hant
2003年論文
@zh-hk
2003年論文
@zh-mo
2003年論文
@zh-tw
2003年论文
@wuu
name
Overall structure and sugar dy ...... 31P chemical shift anisotropy
@ast
Overall structure and sugar dy ...... 31P chemical shift anisotropy
@en
Overall structure and sugar dy ...... 31P chemical shift anisotropy
@nl
type
label
Overall structure and sugar dy ...... 31P chemical shift anisotropy
@ast
Overall structure and sugar dy ...... 31P chemical shift anisotropy
@en
Overall structure and sugar dy ...... 31P chemical shift anisotropy
@nl
prefLabel
Overall structure and sugar dy ...... 31P chemical shift anisotropy
@ast
Overall structure and sugar dy ...... 31P chemical shift anisotropy
@en
Overall structure and sugar dy ...... 31P chemical shift anisotropy
@nl
P2093
P3181
P356
P1476
Overall structure and sugar dy ...... 31P chemical shift anisotropy
@en
P2093
Frank Delaglio
Nico Tjandra
Victor B Zhurkin
Zhengrong Wu
P2888
P304
P3181
P356
10.1023/A:1024047103398
P577
2003-08-01T00:00:00Z
P6179
1050469301