Protein structure and evolutionary history determine sequence space topology
about
On the evolution of the standard amino-acid alphabetCauses of evolutionary rate variation among protein sitesMerging molecular mechanism and evolution: theory and computation at the interface of biophysics and evolutionary population geneticsComparing Residue Clusters from Thermophilic and Mesophilic Enzymes Reveals Adaptive MechanismsCovariation of branch lengths in phylogenies of functionally related genesSimultaneous alignment and folding of protein sequencesDivergence, recombination and retention of functionality during protein evolution.Structural determinants of the rate of protein evolution in yeast.The evolution of protein structures and structural ensembles under functional constraint.The network of sequence flow between protein structures.Improvisation in evolution of genes and genomes: whose structure is it anyway?Statistical potentials for improved structurally constrained evolutionary models.The Role of Evolutionary Selection in the Dynamics of Protein Structure Evolution.Fold designability, distribution, and diseaseProtein and DNA sequence determinants of thermophilic adaptation.In silico identification of functional divergence between the multiple groEL gene paralogs in Chlamydiae.A first-principles model of early evolution: emergence of gene families, species, and preferred protein folds.Use of machine learning algorithms to classify binary protein sequences as highly-designable or poorly-designablePhysics and evolution of thermophilic adaptation.PROTS-RF: a robust model for predicting mutation-induced protein stability changes.The relationship between relative solvent accessibility and evolutionary rate in protein evolution.Protein structural modularity and robustness are associated with evolvability.Systematic assessment of accuracy of comparative model of proteins belonging to different structural fold classes.Alpha Helices Are More Robust to Mutations than Beta StrandsProtein folding thermodynamics and dynamics: where physics, chemistry, and biology meet.Functionality and the evolution of marginal stability in proteins: inferences from lattice simulationsShape-dependent designability studies of lattice proteins.Extensive functional diversification of the Populus glutathione S-transferase supergene family.Tethering preferences of domain families co-occurring in multi-domain proteins.Outer membrane protein folding from an energy landscape perspective.How Many Protein Sequences Fold to a Given Structure? A Coevolutionary Analysis.Two modes of protein sequence evolution and their compositional dependencies.Chitinolytic functions in actinobacteria: ecology, enzymes, and evolution
P2860
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P2860
Protein structure and evolutionary history determine sequence space topology
description
2005 nî lūn-bûn
@nan
2005 թուականի Մարտին հրատարակուած գիտական յօդուած
@hyw
2005 թվականի մարտին հրատարակված գիտական հոդված
@hy
2005年の論文
@ja
2005年論文
@yue
2005年論文
@zh-hant
2005年論文
@zh-hk
2005年論文
@zh-mo
2005年論文
@zh-tw
2005年论文
@wuu
name
Protein structure and evolutionary history determine sequence space topology
@ast
Protein structure and evolutionary history determine sequence space topology
@en
type
label
Protein structure and evolutionary history determine sequence space topology
@ast
Protein structure and evolutionary history determine sequence space topology
@en
prefLabel
Protein structure and evolutionary history determine sequence space topology
@ast
Protein structure and evolutionary history determine sequence space topology
@en
P2860
P356
P1433
P1476
Protein structure and evolutionary history determine sequence space topology
@en
P2093
Charles Delisi
Eric Deeds
P2860
P304
P356
10.1101/GR.3133605
P577
2005-03-01T00:00:00Z
P5875
P698
P818
q-bio/0404040