Comparative genomics of bacterial and plant folate synthesis and salvage: predictions and validations - Test2 - elhamkhani - TriplyDB

Comparative genomics of bacterial and plant folate synthesis and salvage: predictions and validations

Comparative genomics of bacterial and plant folate synthesis and salvage: predictions and validations

http://www.wikidata.org/entity/Q33291455

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A eubacterial riboswitch class that senses the coenzyme tetrahydrofolate Variations in metabolic pathways create challenges for automated metabolic reconstructions: Examples from the tetrahydrofolate synthesis pathway The alternative translational profile that underlies the immune-evasive state of persistence in Chlamydiaceae exploits differential tryptophan contents of the protein repertoire Escherichia coli Nissle 1917 enhances bioavailability of serotonin in gut tissues through modulation of synthesis and clearance.Structure of Aminodeoxychorismate Synthase from Stenotrophomonas maltophilia The Structure and Competitive Substrate Inhibition of Dihydrofolate Reductase from Enterococcus faecalis Reveal Restrictions to Cofactor Docking FolX and FolM are essential for tetrahydromonapterin synthesis in Escherichia coli and Pseudomonas aeruginosa Completing the folate biosynthesis pathway in Plasmodium falciparum: p-aminobenzoate is produced by a highly divergent promiscuous aminodeoxychorismate lyase Identification of transport-critical residues in a folate transporter from the folate-biopterin transporter (FBT) family.A comparative genomics perspective on the genetic content of the alkaliphilic haloarchaeon Natrialba magadii ATCC 43099T.The complete genome sequence of 'Candidatus Liberibacter solanacearum', the bacterium associated with potato zebra chip disease.High-frequency transposition for determining antibacterial mode of action.Genetic screening of functional properties of lactic acid bacteria in a fermented pearl millet slurry and in the metagenome of fermented starchy foods Promiscuous and adaptable enzymes fill "holes" in the tetrahydrofolate pathway in Chlamydia species.A comparative genomics screen identifies a Sinorhizobium meliloti 1021 sodM-like gene strongly expressed within host plant nodules Genetic diversity within the genus Francisella as revealed by comparative analyses of the genomes of two North American isolates from environmental sources.Moonlighting glutamate formiminotransferases can functionally replace 5-formyltetrahydrofolate cycloligase.Streptococcus pneumoniae folate biosynthesis responds to environmental CO2 levels Complex patterns of gene fission in the eukaryotic folate biosynthesis pathway.Indigenous bacteria from the gut microbiota regulate host serotonin biosynthesis.Comparative genome analysis of Pediococcus damnosus LMG 28219, a strain well-adapted to the beer environment Mitochondrial and plastidial COG0354 proteins have folate-dependent functions in iron-sulphur cluster metabolism.Folate production by probiotic bacteria.Protein Homeostasis Imposes a Barrier on Functional Integration of Horizontally Transferred Genes in Bacteria "Wigglesworthia morsitans" Folate (Vitamin B9) Biosynthesis Contributes to Tsetse Host Fitness.Identification of the Genes Required for the Culture of Liberibacter crescens, the Closest Cultured Relative of the Liberibacter Plant Pathogens.Evolution of bacterial trp operons and their regulation.Experimental and Metabolic Modeling Evidence for a Folate-Cleaving Side-Activity of Ketopantoate Hydroxymethyltransferase (PanB).Identification of genes encoding the folate- and thiamine-binding membrane proteins in Firmicutes.A Gateway platform for functional genomics in Haloferax volcanii: deletion of three tRNA modification genes.6-pyruvoyltetrahydropterin synthase paralogs replace the folate synthesis enzyme dihydroneopterin aldolase in diverse bacteria.Functional Annotations of Paralogs: A Blessing and a Curse Canonical and ECF-type ATP-binding cassette importers in prokaryotes: diversity in modular organization and cellular functions.Metabolic modeling of energy balances in Mycoplasma hyopneumoniae shows that pyruvate addition increases growth rate.Utility of the Biosynthetic Folate Pathway for Targets in Antimicrobial Discovery.Lactic acid fermentation as a tool for increasing the folate content of foods.Mechanisms of Resistance to Folate Pathway Inhibitors in Burkholderia pseudomallei: Deviation from the Norm.Exploring the biocombinatorial potential of benzoxazoles: generation of novel caboxamycin derivatives.The Variable Regions of Lactobacillus rhamnosus Genomes Reveal the Dynamic Evolution of Metabolic and Host-Adaptation Repertoires.Plasmodium falciparum: a paradigm for alternative folate biosynthesis in diverse microorganisms?

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P2860

Comparative genomics of bacterial and plant folate synthesis and salvage: predictions and validations

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Basma El Yacoubi

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Rocío Díaz de la Garza

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P2860

Swine and poultry pathogens: the complete genome sequences of two strains of Mycoplasma hyopneumoniae and a strain of Mycoplasma synoviae

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

Tetrahydrofolate biosynthesis in plants: molecular and functional characterization of dihydrofolate synthetase and three isoforms of folylpolyglutamate synthetase in Arabidopsis thaliana

STRING: known and predicted protein-protein associations, integrated and transferred across organisms

Multiple sequence alignment with the Clustal series of programs

Characterization and sequence of Escherichia coli pabC, the gene encoding aminodeoxychorismate lyase, a pyridoxal phosphate-containing enzyme

Call for an enzyme genomics initiative

Can sequence determine function?

The subsystems approach to genome annotation and its use in the project to annotate 1000 genomes

Pteridine reductase mechanism correlates pterin metabolism with drug resistance in trypanosomatid parasites

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