STRING: known and predicted protein-protein associations, integrated and transferred across organisms - Test2 - elhamkhani - TriplyDB

STRING: known and predicted protein-protein associations, integrated and transferred across organisms

STRING: known and predicted protein-protein associations, integrated and transferred across organisms

http://www.wikidata.org/entity/Q24558597

about

The Sorcerer II Global Ocean Sampling expedition: expanding the universe of protein families Biomedical discovery acceleration, with applications to craniofacial development Global functional atlas of Escherichia coli encompassing previously uncharacterized proteins Ulysses - an application for the projection of molecular interactions across species.Supergenomic network compression and the discovery of EXP1 as a glutathione transferase inhibited by artesunate Environments shape the nucleotide composition of genomes.A large-scale evaluation of computational protein function prediction Evaluation of an Ontology-anchored Natural Language-based Approach for Asserting Multi-scale Biomolecular Networks for Systems Medicine eggNOG v3.0: orthologous groups covering 1133 organisms at 41 different taxonomic ranges Construction and analysis of protein-protein interaction networks STRING 8--a global view on proteins and their functional interactions in 630 organisms STRING 7--recent developments in the integration and prediction of protein interactions Genome annotation errors in pathway databases due to semantic ambiguity in partial EC numbers Phydbac "Gene Function Predictor": a gene annotation tool based on genomic context analysis.Analysis of and function predictions for previously conserved hypothetical or putative proteins in Blochmannia floridanus Gene annotation and network inference by phylogenetic profiling.SMART 5: domains in the context of genomes and networks SCOPPI: a structural classification of protein-protein interfaces A global definition of expression context is conserved between orthologs, but does not correlate with sequence conservation.MaGe: a microbial genome annotation system supported by synteny results ODB: a database of operons accumulating known operons across multiple genomes.pSTIING: a 'systems' approach towards integrating signalling pathways, interaction and transcriptional regulatory networks in inflammation and cancer.Review on Graph Clustering and Subgraph Similarity Based Analysis of Neurological Disorders Systems biology as a comparative approach to understand complex gene expression in neurological diseases Popular computational methods to assess multiprotein complexes derived from label-free affinity purification and mass spectrometry (AP-MS) experiments Using biological networks to improve our understanding of infectious diseases Multiscale models of cell signaling.SuperTarget and Matador: resources for exploring drug-target relationships Structure, dynamics, and interaction of Mycobacterium tuberculosis (Mtb) DprE1 and DprE2 examined by molecular modeling, simulation, and electrostatic studies Molecularly and clinically related drugs and diseases are enriched in phenotypically similar drug-disease pairs The crystal structure of the AF2331 protein from Archaeoglobus fulgidus DSM 4304 forms an unusual interdigitated dimer with a new type of alpha + beta fold.Structural Insights into Putative Molybdenum Cofactor Biosynthesis Protein C (MoaC2) from Mycobacterium tuberculosis H37Rv Toward the structural genomics of complexes: Crystal structure of a PE/PPE protein complex from Mycobacterium tuberculosis Assessing systems properties of yeast mitochondria through an interaction map of the organelle ApoptomiRs of Breast Cancer: Basics to Clinics Human microRNAs profiling in response to influenza A viruses (subtypes pH1N1, H3N2, and H5N1)STITCH: interaction networks of chemicals and proteins Prediction of body fluids where proteins are secreted into based on protein interaction network BiologicalNetworks--tools enabling the integration of multi-scale data for the host-pathogen studies Survey of activated FLT3 signaling in leukemia

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P2860

STRING: known and predicted protein-protein associations, integrated and transferred across organisms

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description

2005 nî lūn-bûn

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2005 թուականի Յունուարին հրատարակուած գիտական յօդուած

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2005 թվականի հունվարին հրատարակված գիտական հոդված

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2005年の論文

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2005年論文

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2005年論文

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2005年論文

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2005年論文

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2005年論文

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2005年论文

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name

STRING: known and predicted pr ...... d transferred across organisms

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STRING: known and predicted pr ...... d transferred across organisms

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STRING: known and predicted pr ...... d transferred across organisms

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STRING: known and predicted pr ...... d transferred across organisms

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Nucleic Acids Research

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Markus Krupp

http://www.w3.org/2001/XMLSchema#string

Mathilde Foglierini

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Nelly Jouffre

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Sean D Hooper

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P2860

The COG database: an updated version includes eukaryotes

Functional organization of the yeast proteome by systematic analysis of protein complexes

IntAct: an open source molecular interaction database

STRING: a database of predicted functional associations between proteins

PreBIND and Textomy--mining the biomedical literature for protein-protein interactions using a support vector machine

Prolinks: a database of protein functional linkages derived from coevolution

The KEGG resource for deciphering the genome

The Database of Interacting Proteins: 2004 update

A gene-coexpression network for global discovery of conserved genetic modules

BIND: the Biomolecular Interaction Network Database

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D433-7

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418109

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10.1093/NAR/GKI005

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Database issue

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33

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Lars Juhl Jensen

Christian von Mering

Martijn A Huynen

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2005-01-01T00:00:00Z

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8122296

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15608232

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protein–protein interaction

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539959

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