ORegAnno: an open-access community-driven resource for regulatory annotation - Wikidata - wikimedia - TriplyDB

ORegAnno: an open-access community-driven resource for regulatory annotation

ORegAnno: an open-access community-driven resource for regulatory annotation

http://www.wikidata.org/entity/Q24648942

about

Chapter 11: Genome-wide association studies Use of data-biased random walks on graphs for the retrieval of context-specific networks from genomic data CollecTF: a database of experimentally validated transcription factor-binding sites in Bacteria Exome sequencing identifies recurrent SPOP, FOXA1 and MED12 mutations in prostate cancer Silencing of p130cas in ovarian carcinoma: a novel mechanism for tumor cell death ConTra: a promoter alignment analysis tool for identification of transcription factor binding sites across species The UCSC Genome Browser Database: update 2009 Structure and dynamics of molecular networks: a novel paradigm of drug discovery: a comprehensive review ORegAnno 3.0: a community-driven resource for curated regulatory annotation TargetMine, an integrated data warehouse for candidate gene prioritisation and target discovery Integrated bio-entity network: a system for biological knowledge discovery Histone demethylase Jumonji D3 (JMJD3) as a tumor suppressor by regulating p53 protein nuclear stabilization Supporting community annotation and user collaboration in the integrated microbial genomes (IMG) system Strategies to design and analyze targeted sequencing data: cohorts for Heart and Aging Research in Genomic Epidemiology (CHARGE) Consortium Targeted Sequencing Study GRASP: analysis of genotype-phenotype results from 1390 genome-wide association studies and corresponding open access database Whole-genome sequence-based analysis of high-density lipoprotein cholesterol Enhancing navigation in biomedical databases by community voting and database-driven text classification The mutational landscape of head and neck squamous cell carcinoma HTRIdb: an open-access database for experimentally verified human transcriptional regulation interactions RegTransBase--a database of regulatory sequences and interactions based on literature: a resource for investigating transcriptional regulation in prokaryotes TranscriptomeBrowser 3.0: introducing a new compendium of molecular interactions and a new visualization tool for the study of gene regulatory networks.LASAGNA: a novel algorithm for transcription factor binding site alignment Navigating the multilayered organization of eukaryotic signaling: a new trend in data integration.Inferring Selective Constraint from Population Genomic Data Suggests Recent Regulatory Turnover in the Human Brain.An integrative data analysis platform for gene set analysis and knowledge discovery in a data warehouse framework Inferring active regulatory networks from gene expression data using a combination of prior knowledge and enrichment analysis.myGRN: a database and visualisation system for the storage and analysis of developmental genetic regulatory networks An effective tri-clustering algorithm combining expression data with gene regulation information.LINNAEUS: a species name identification system for biomedical literature.Naturally occurring deletions of hunchback binding sites in the even-skipped stripe 3+7 enhancer Semantic integration of data on transcriptional regulation.Most transcription factor binding sites are in a few mosaic classes of the human genome.Babelomics: an integrative platform for the analysis of transcriptomics, proteomics and genomic data with advanced functional profiling.PriorsEditor: a tool for the creation and use of positional priors in motif discovery.Large-scale analysis of tandem repeat variability in the human genome Robust target gene discovery through transcriptome perturbations and genome-wide enhancer predictions in Drosophila uncovers a regulatory basis for sensory specification.Identification of hookworm DAF-16/FOXO response elements and direct gene targets.Functional annotation signatures of disease susceptibility loci improve SNP association analysis.Patterns of human gene expression variance show strong associations with signaling network hierarchy.Expanded methyl-sensitive cut counting reveals hypomethylation as an epigenetic state that highlights functional sequences of the genome.

P2860

Q21145310-0F2F7D53-91FE-4A6F-85F5-89191538541E Q21145334-8F10D87F-69C6-40B3-B70B-BEDC8E1D4884 Q23793570-C466948C-B595-4390-9B37-591AA908B81A Q24616117-1765EA2A-F89A-4D27-B3F0-F0FF14ABFC45 Q24632721-2DCB051B-77C6-43AA-B9A9-E8CEACFCA282 Q24646306-62BCA865-23D7-45E1-B4A7-1DBE6295442D Q24656112-7A386FE6-23D9-4AD3-957A-1BE0883B1209 Q27008867-333F571C-FB21-4B7C-94C5-5B45DA8C81D3 Q28269966-754AEAC5-5D22-465E-8881-EA5894B3B0BB Q28477365-775519C8-DBF3-4749-9556-84C50357A02D Q28478766-D30F18DD-E40C-4595-BCD2-B475FDB761FA Q28484242-9407D969-0470-43D2-934D-76222F09798D Q28603686-801AFB30-9F96-439A-9BD5-022821559486 Q28655423-854AE08C-5941-4E15-BBDC-5BE4B4CA4CDB Q28657400-BDC29886-5C11-4A8E-BCFF-33F9C962D97B Q28659476-7A85669F-5B49-4CEB-94FD-5A5C79BDE2B5 Q28750347-D41A9AED-5167-4E87-885C-21CA3C0DBECF Q29614654-DDF156A4-097F-4399-8B6C-5A415B77E874 Q30485647-AF172642-141F-4DC2-B43B-F6F35D5C4B6A Q30486063-B8D7A0D3-C092-4B4D-98BB-C040914B343B Q30520094-CCB1241A-65A4-4173-A905-7DA9E8DA6B3E Q30543236-EAFA2F64-CC0C-4150-9F3A-A245B3FA07D3 Q30759763-EE721251-1D80-4901-913E-61A0E2BA34E4 Q31026943-FAFEBED4-1489-4124-8E97-61ABC6A59EE1 Q31060244-6E6CFB37-F4D5-41C8-83C9-EE2D2B7FB6C5 Q31107770-764C23DE-CB36-486D-BFBB-911C58FCFA40 Q33461944-4BA1C7FD-1669-4BAB-BCB0-8A43B13C6482 Q33511251-3ADD5407-A0C0-48CF-9D1A-CEDE66ACF2D9 Q33530716-D8B6412B-A095-4A3F-B4C1-A6CE6FFE781A Q33553273-86353071-428E-4FE1-B6FE-92809FC3D7DF Q33567546-8DAD684A-B2D3-4986-B563-F616DCF330B3 Q33575022-0D400936-C00C-4BB7-80AC-B3D754322E2C Q33579781-EB11BE46-5C11-4060-AEAB-0EE5677863CB Q33632045-283E002C-1471-49B0-98CB-449144E2DB79 Q33635450-7B0B1AA6-7B4D-46EC-823F-E1A3E2C3DD08 Q33644434-3C030BAE-FC4A-4416-9887-0560223329A3 Q33680339-00F2348E-E787-403D-8759-561BE3B4038D Q33701048-46606770-CA0D-4340-98B1-8104EADCD8D8 Q33745661-DEE43418-1166-461B-B0B9-6AB47D5DB91C Q33908086-28D71FE3-437B-4421-A266-9BCBBC50A4CD

P2860

ORegAnno: an open-access community-driven resource for regulatory annotation

http://www.wikidata.org/entity/Q24648942

description

2008 nî lūn-bûn

@nan

2008 թուականի Յունուարին հրատարակուած գիտական յօդուած

@hyw

2008 թվականի հունվարին հրատարակված գիտական հոդված

@hy

2008年の論文

@ja

2008年論文

@yue

2008年論文

@zh-hant

2008年論文

@zh-hk

2008年論文

@zh-mo

2008年論文

@zh-tw

2008年论文

@wuu

name

ORegAnno: an open-access community-driven resource for regulatory annotation

@ast

ORegAnno: an open-access community-driven resource for regulatory annotation

@en

ORegAnno: an open-access community-driven resource for regulatory annotation

@nl

type

label

ORegAnno: an open-access community-driven resource for regulatory annotation

@ast

ORegAnno: an open-access community-driven resource for regulatory annotation

@en

ORegAnno: an open-access community-driven resource for regulatory annotation

@nl

prefLabel

ORegAnno: an open-access community-driven resource for regulatory annotation

@ast

ORegAnno: an open-access community-driven resource for regulatory annotation

@en

ORegAnno: an open-access community-driven resource for regulatory annotation

@nl

P1433

Q24648942-F529F3AE-26DE-4037-97FA-1EB751A4446A

P1476

Q24648942-1F436F72-7769-4FB0-92F6-C927AC68CB68

P2093

Q24648942-12D857AD-FE7C-482D-B88E-44BA6C5A879E

Q24648942-196DBE28-251C-487F-9F79-13B9D9F4D51B

Q24648942-30A9160C-E3E8-4784-A434-4420E5B8D52A

Q24648942-351216D8-DEEB-4903-9FDE-46C6BBA5ABFA

Q24648942-3523C434-1E8C-4B9C-8BF7-826D0BB2586C

Q24648942-67ECB04D-209E-441F-AB8E-2F79BB1ADE5C

Q24648942-75AB4E23-7D09-42DB-B945-7FD22845895F

Q24648942-75EC708D-66B1-4606-998B-F041A200295D

Q24648942-7D91609C-F26F-44C4-B5A8-5C88C54A7B4C

Q24648942-9297F076-F542-434F-ACC4-22B553402783

P2860

Q24648942-04C155DB-0162-429A-9F8A-BB6AB9FDC929

Q24648942-158F93D1-EF01-47B3-A5EB-EF7DD458C393

Q24648942-1A9A87DB-3A10-48EE-B02C-1F48B1C5C428

Q24648942-280B7647-50BA-4B96-B465-4FAB346D3FE4

Q24648942-3205864A-3E55-4DF8-B5C4-3C296722F0C0

Q24648942-448E679C-0D8D-4451-BF04-F04B09EC216C

Q24648942-458123F9-3D99-4C33-A142-8F1274D4BC60

Q24648942-46DDAD0F-3D09-43E4-BE43-D1F27EEAAEC5

Q24648942-6950789C-58DA-447D-B2B7-2BA6EA02547A

Q24648942-829A8319-D80E-4DA4-9C08-DFC2F9B1D9D8

P304

Q24648942-CE59C387-F269-40D8-B029-0091209E216B

P31

Q24648942-73D7755A-8ABB-4FD3-AB57-06B7683768D7

P3181

Q24648942-68F37810-C3A2-4C7E-A14E-8C6DABD395E1

P356

Q24648942-9676E568-514C-4A0C-B598-01E6D367EA13

P407

Q24648942-82E962FD-D407-499B-87A0-1BB424EA788D

P433

Q24648942-3D6603D4-B8B2-4A5B-ADBB-FD6D7A08A46D

P478

Q24648942-DFA778CA-FED0-46D8-8BCF-8882652D1ED2

P50

Q24648942-141A77E4-00DB-4356-8CD9-0529C9621515

Q24648942-45F55E4D-4647-49B3-8293-7DDFF1A0C24A

Q24648942-5CBE1B3F-661F-4093-B46B-4D08078F4AC1

Q24648942-6DD9D9DA-09AF-4E29-8111-DA86B3719DBE

Q24648942-9410C890-4A14-4AFA-A474-E729D5F537BD

Q24648942-9DAD1811-4D66-4824-9915-D4AAEC220B22

Q24648942-AD77A8DB-90D9-4C4D-A158-84D6C80D3B58

Q24648942-C9150BB6-06FD-4A89-9272-B29696735809

Q24648942-CEA4D6D6-2431-4FB8-8013-946D8B1484DF

Q24648942-E2738F19-FDE4-4499-9646-91D90EFB29E8

P577

Q24648942-A586896B-895B-4F7D-B8C2-7DCC35DD0F40

P5875

Q24648942-4FBFE27B-9F93-4791-8853-848751448794

P698

Q24648942-4B3AC5B1-A620-406F-8635-E3AD5C533474

P932

Q24648942-FA29B970-DD19-416F-8A45-07F2A8F3182C

P3181

P356

P1433

Nucleic Acids Research

P1476

ORegAnno: an open-access community-driven resource for regulatory annotation

@en

P2093

Amy Ticoll

http://www.w3.org/2001/XMLSchema#string

Bart Hooghe

http://www.w3.org/2001/XMLSchema#string

Belinda Giardine

http://www.w3.org/2001/XMLSchema#string

Bridget Bernier

http://www.w3.org/2001/XMLSchema#string

Bryan Chu

http://www.w3.org/2001/XMLSchema#string

Claes Wadelius

http://www.w3.org/2001/XMLSchema#string

Dominique Vlieghe

http://www.w3.org/2001/XMLSchema#string

Gordon Robertson

http://www.w3.org/2001/XMLSchema#string

Ian J Donaldson

http://www.w3.org/2001/XMLSchema#string

Katayoon Kasaian

http://www.w3.org/2001/XMLSchema#string

P2860

TRANSFAC and its module TRANSCompel: transcriptional gene regulation in eukaryotes

Analysis of the vertebrate insulator protein CTCF-binding sites in the human genome

VISTA Enhancer Browser--a database of tissue-specific human enhancers

TXTGate: profiling gene groups with text-based information

oPOSSUM: identification of over-represented transcription factor binding sites in co-expressed genes.

cisRED: a database system for genome-scale computational discovery of regulatory elements.

A new generation of JASPAR, the open-access repository for transcription factor binding site profiles

ABS: a database of Annotated regulatory Binding Sites from orthologous promoters.

DBTGR: a database of tunicate promoters and their regulatory elements.

Transcriptional regulatory code of a eukaryotic genome.

P304

D107-13

http://www.w3.org/2001/XMLSchema#string

P31

scholarly article

P3181

1008349

http://www.w3.org/2001/XMLSchema#string

P356

10.1093/NAR/GKM967

http://www.w3.org/2001/XMLSchema#string

P407

P433

Database issue

http://www.w3.org/2001/XMLSchema#string

P478

36

http://www.w3.org/2001/XMLSchema#string

P50

Malachi Griffith

Wyeth Wasserman

Casey M Bergman

Elodie Portales-Casamar

P577

2008-01-01T00:00:00Z

http://www.w3.org/2001/XMLSchema#dateTime

P5875

5839643

http://www.w3.org/2001/XMLSchema#string

P698

18006570

http://www.w3.org/2001/XMLSchema#string

P932

2239002

http://www.w3.org/2001/XMLSchema#string