oPOSSUM: identification of over-represented transcription factor binding sites in co-expressed genes. - Wikidata - wikimedia - TriplyDB

oPOSSUM: identification of over-represented transcription factor binding sites in co-expressed genes.

oPOSSUM: identification of over-represented transcription factor binding sites in co-expressed genes.

http://www.wikidata.org/entity/Q24810241

about

Isoform diversity and regulation in peripheral and central neurons revealed through RNA-Seq Microarray analysis of Foxa2 mutant mouse embryos reveals novel gene expression and inductive roles for the gastrula organizer and its derivatives Multimodal regulation of E2F1 gene expression by progestins Estrogen receptor alpha controls a gene network in luminal-like breast cancer cells comprising multiple transcription factors and microRNAs Exonic remnants of whole-genome duplication reveal cis-regulatory function of coding exons ORegAnno: an open-access community-driven resource for regulatory annotation JASPAR, the open access database of transcription factor-binding profiles: new content and tools in the 2008 update A new generation of JASPAR, the open-access repository for transcription factor binding site profiles The Gene Set Builder: collation, curation, and distribution of sets of genes A guide for functional analysis of BRCA1 variants of uncertain significance STAT2 deficiency and susceptibility to viral illness in humans Cockayne syndrome group B protein (CSB) plays a general role in chromatin maintenance and remodeling ORegAnno: an open access database and curation system for literature-derived promoters, transcription factor binding sites and regulatory variation Overrepresentation of transcription factor families in the genesets underlying breast cancer subtypes A cross-study analysis of prenatal exposures to environmental contaminants and the epigenome: support for stress-responsive transcription factor occupancy as a mediator of gene-specific CpG methylation patterning In silico detection of sequence variations modifying transcriptional regulation Development of resistance towards artesunate in MDA-MB-231 human breast cancer cells A systems biology approach to characterize the regulatory networks leading to trabectedin resistance in an in vitro model of myxoid liposarcoma The genetic architecture of the genome-wide transcriptional response to ER stress in the mouse Treatment with the reactive oxygen species scavenger EUK-207 reduces lung damage and increases survival during 1918 influenza virus infection in mice Neural stem/progenitor cell properties of glial cells in the adult mouse auditory nerve.Genome-wide microarray comparison reveals downstream genes of Pax6 in the developing mouse cerebellum.InnateDB: facilitating systems-level analyses of the mammalian innate immune response.LOESS correction for length variation in gene set-based genomic sequence analysis.CluGene: A Bioinformatics Framework for the Identification of Co-Localized, Co-Expressed and Co-Regulated Genes Aimed at the Investigation of Transcriptional Regulatory Networks from High-Throughput Expression Data.Analysis of gene expression data using a linear mixed model/finite mixture model approach: application to regional differences in the human brain.The PhenoGen informatics website: tools for analyses of complex traits.Genome-wide prediction of transcriptional regulatory elements of human promoters using gene expression and promoter analysis data.A computational genomics approach to identify cis-regulatory modules from chromatin immunoprecipitation microarray data--a case study using E2F1 Genomic targets of the KRAB and SCAN domain-containing zinc finger protein 263 Predicting transcription factor binding sites using local over-representation and comparative genomics.A survey of genomic properties for the detection of regulatory polymorphisms.Wide-scale analysis of human functional transcription factor binding reveals a strong bias towards the transcription start site.Meta-analysis of breast cancer microarray studies in conjunction with conserved cis-elements suggest patterns for coordinate regulation DiRE: identifying distant regulatory elements of co-expressed genes.Integrative analysis of RUNX1 downstream pathways and target genes.Meta-analysis of expression signatures of muscle atrophy: gene interaction networks in early and late stages.Human and murine kidneys show gender- and species-specific gene expression differences in response to injury Filling gaps in PPAR-alpha signaling through comparative nutrigenomics analysis.Functional annotation of novel lineage-specific genes using co-expression and promoter analysis

P2860

Q21134805-140B4E60-4D4E-411D-8308-14C132C131FB Q21263163-B6A687A6-999F-40C9-86A0-F779794617E4 Q24604986-538CA38F-5CE0-40A8-9D02-9BE77CFAEB05 Q24631037-BD7E30DD-5C0E-462B-ACDE-6D318195AD9B Q24634097-E1809F94-9020-4247-B83A-FC775A7AF1A5 Q24648942-458123F9-3D99-4C33-A142-8F1274D4BC60 Q24650787-D62DAB69-C3D6-422A-9AA1-89D9DA88CA32 Q25255984-09B53A82-95BA-430E-A987-31C591C405BA Q25256634-C4F3C24B-8295-42DA-B58B-E3B6A5CC8D33 Q26829268-AB7E5ECC-D1F2-41C6-B038-038E9EBFC4E5 Q28115608-6E5BD211-40C2-432C-B376-70AD85E32711 Q28245824-A43E02A7-CBCF-49AF-A4FF-EC583ABFF191 Q28290181-B08C5E8E-6CA7-4D0D-93F5-EBF789A50D93 Q28388563-2D09A799-B297-43D8-A770-EAD863346526 Q28391563-CEB35686-0BCE-4556-963C-D367408B375F Q28472006-1BC33DFE-E158-442C-93CD-D4C21E89AF74 Q28478307-045A8524-FA61-4968-A322-D8D421A48D30 Q28482357-00F591B8-0F38-43F3-8AA3-B082209BC66C Q28546777-9CE832F5-B0D5-41EF-88AE-F61BC3D7E35F Q30354730-3987A379-0269-49EF-BB94-46B3E579FBA2 Q30404411-4DCB037E-1938-4C5F-984E-56D6BEAEB01A Q30410283-0A1E8C30-53B3-4851-9165-F79C15D96158 Q30484002-E33C7A62-25A2-4C0D-8C60-07A633B0E843 Q30514135-B19BD1ED-9A56-4BE4-B0E4-2E17949AC236 Q30653046-16E89AB1-E8D2-4961-AAF3-CBD377E95BD8 Q30755496-A6C2C354-BA3E-4389-9BE5-4DCA5EEF78A9 Q30833773-032A39D8-6107-4235-BDED-A999791A56A7 Q31047813-633CFF43-C30B-4C6D-B3A2-9AF038954B01 Q31068338-F4861B98-CBFB-4634-9D36-38FC718E5AB1 Q31814776-E5625415-F7D9-4BBF-BD81-B9D9E2B82BD3 Q33255962-DA72AEB9-DBE6-4D75-B664-AB46F9C68207 Q33287187-B68396A2-5624-4A49-BEF7-FF19F99DB145 Q33295393-26CF76E4-4A2C-4427-B35E-D198A9869C23 Q33316875-F9775B15-FFDC-4789-81EA-2436A9596F0E Q33335674-66A0B343-67AD-4DEF-8423-8466B1FC723C Q33356764-6415CE32-9BD4-495B-9725-E9F862C2626F Q33395836-E6105B2B-017A-4519-9EC8-4690CDAA168E Q33416779-59B1BE66-F6ED-48FB-9F14-CA8473386474 Q33517939-2DBD7542-EE69-45C6-9B33-EC64DDE87AEB Q33538888-EF2B4C3A-2886-49BC-A363-40324E780948

P2860

oPOSSUM: identification of over-represented transcription factor binding sites in co-expressed genes.

http://www.wikidata.org/entity/Q24810241

description

2005 nî lūn-bûn

@nan

2005 թուականի Յունիսին հրատարակուած գիտական յօդուած

@hyw

2005 թվականի հունիսին հրատարակված գիտական հոդված

@hy

2005年の論文

@ja

2005年論文

@yue

2005年論文

@zh-hant

2005年論文

@zh-hk

2005年論文

@zh-mo

2005年論文

@zh-tw

2005年论文

@wuu

name

oPOSSUM: identification of ove ...... ng sites in co-expressed genes

@nl

oPOSSUM: identification of ove ...... g sites in co-expressed genes.

@ast

oPOSSUM: identification of ove ...... g sites in co-expressed genes.

@en

type

label

oPOSSUM: identification of ove ...... ng sites in co-expressed genes

@nl

oPOSSUM: identification of ove ...... g sites in co-expressed genes.

@ast

oPOSSUM: identification of ove ...... g sites in co-expressed genes.

@en

prefLabel

oPOSSUM: identification of ove ...... ng sites in co-expressed genes

@nl

oPOSSUM: identification of ove ...... g sites in co-expressed genes.

@ast

oPOSSUM: identification of ove ...... g sites in co-expressed genes.

@en

P1433

Q24810241-B1ED8EA9-9A82-4BE4-8551-D24A300E605F

P1476

Q24810241-998FE3C6-74FC-4783-B5B2-C5546772F929

P2093

Q24810241-0C1C646E-DC18-4013-857C-88CA2BD13D02

Q24810241-0E2DAEFD-3D64-4DFF-A293-D26ACD12EB9B

Q24810241-241955B1-F2DC-40C0-80BB-0585663AB771

Q24810241-5B97AFF9-A80B-4A2E-B419-5BD091F6B2BC

Q24810241-8D22867A-1D4A-4D0F-AC08-03934E4C6C4D

P2860

Q24810241-04EA919F-B249-4EDA-8A86-8BF06FE4DED0

Q24810241-0584474C-F8FD-488F-8219-E3C96EEF1376

Q24810241-11A5E059-C397-4F85-AE69-1D48AFD50097

Q24810241-1A8EC8ED-41E0-4285-817C-DF70635A04BB

Q24810241-1E055A7B-6E36-4D9D-B870-3A1587CB478C

Q24810241-2982B4F8-D951-4A08-B4A4-0826EEB0C5B6

Q24810241-2D1C7FF4-6E8A-4147-9B18-CEB4BCD9B34C

Q24810241-3D3F847C-AC4E-418D-A7C1-FE139AF823B3

Q24810241-443D841D-C8CC-4DD0-956D-BD5D20EDB651

Q24810241-46483D73-2337-4FFC-94F7-D2994824A561

P304

Q24810241-908E253B-B748-406F-837D-57DCE76B426D

P31

Q24810241-EACFD6DB-7720-49A5-95EC-3D210E5335DB

P3181

Q24810241-A9AC9182-4961-4C06-96F9-60D0679AF9DE

P356

Q24810241-2F2B7215-8C2C-4B56-9F0B-5ED6A0C7AD1D

P407

Q24810241-5188A5C9-F89A-4F1F-A63B-8ECE019B103F

P433

Q24810241-099D69E0-4121-48D9-8BAD-C64A2A24DC3D

P478

Q24810241-B1B58362-E878-47D4-8919-D6B9DB2A14AF

P50

Q24810241-39BE9B2E-5689-4312-BE1A-0B819471F23A

Q24810241-3D9F90DB-7CD1-41E9-A195-100A1CABED99

P577

Q24810241-C70F4288-5D7B-4DB0-AB7C-E94F6156C404

P5875

Q24810241-98F6B811-9557-4B8C-AA91-9A79115149AF

P698

Q24810241-A1FBCEAA-5F3D-4431-B58B-224A960CC648

P932

Q24810241-A2F6EFDC-D7F6-41C3-90E7-C491F9C6F0FA

P3181

P356

P1433

Nucleic Acids Research

P1476

oPOSSUM: identification of ove ...... g sites in co-expressed genes.

@en

P2093

Brian P Kennedy

http://www.w3.org/2001/XMLSchema#string

Christopher J Walsh

http://www.w3.org/2001/XMLSchema#string

David J Arenillas

http://www.w3.org/2001/XMLSchema#string

James R Mortimer

http://www.w3.org/2001/XMLSchema#string

Shannan J Ho Sui

http://www.w3.org/2001/XMLSchema#string

P2860

TRANSFAC: a database on transcription factors and their DNA binding sites

CORG: a database for COmparative Regulatory Genomics

Identification of conserved regulatory elements by comparative genome analysis

A general method applicable to the search for similarities in the amino acid sequence of two proteins

Functional discovery via a compendium of expression profiles.

DNA binding sites: representation and discovery

NF-kappaB regulation in the immune system

IRF family of transcription factors as regulators of host defense

LAGAN and Multi-LAGAN: efficient tools for large-scale multiple alignment of genomic DNA

Detection of functional DNA motifs via statistical over-representation

P304

3154-3164

http://www.w3.org/2001/XMLSchema#string

P31

scholarly article

P3181

181064

http://www.w3.org/2001/XMLSchema#string

P356

10.1093/NAR/GKI624

http://www.w3.org/2001/XMLSchema#string

P407

P433

10

http://www.w3.org/2001/XMLSchema#string

P478

33

http://www.w3.org/2001/XMLSchema#string

P50

Wyeth Wasserman

P577

2005-06-02T00:00:00Z

http://www.w3.org/2001/XMLSchema#dateTime

P5875

7809403

http://www.w3.org/2001/XMLSchema#string

P698

15933209

http://www.w3.org/2001/XMLSchema#string

P932

1142402

http://www.w3.org/2001/XMLSchema#string