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OrthoDB: the hierarchical catalog of eukaryotic orthologs

OrthoDB: the hierarchical catalog of eukaryotic orthologs

http://www.wikidata.org/entity/Q24650129

about

Comparative genomic analysis of Drosophila melanogaster and vector mosquito developmental genes OrthoFinder: solving fundamental biases in whole genome comparisons dramatically improves orthogroup inference accuracy Difference in gene duplicability may explain the difference in overall structure of protein-protein interaction networks among eukaryotes Genome sequences of the human body louse and its primary endosymbiont provide insights into the permanent parasitic lifestyle OrthoDB: a hierarchical catalog of animal, fungal and bacterial orthologs OrthoDB: the hierarchical catalog of eukaryotic orthologs in 2011 OMA 2011: orthology inference among 1000 complete genomes RNA-seq analyses of blood-induced changes in gene expression in the mosquito vector species, Aedes aegypti Pathogenomics of Culex quinquefasciatus and meta-analysis of infection responses to diverse pathogens Orthology prediction methods: a quality assessment using curated protein families eggNOG v2.0: extending the evolutionary genealogy of genes with enhanced non-supervised orthologous groups, species and functional annotations Discovery of Plasmodium modulators by genome-wide analysis of circulating hemocytes in Anopheles gambiae The bovine lactation genome: insights into the evolution of mammalian milk OrthoDB v8: update of the hierarchical catalog of orthologs and the underlying free software Big data and other challenges in the quest for orthologs Social evolution. Genomic signatures of evolutionary transitions from solitary to group living.FUNGIpath: a tool to assess fungal metabolic pathways predicted by orthology.Under-detection of endospore-forming Firmicutes in metagenomic data Ortholog-Finder: A Tool for Constructing an Ortholog Data Set.SynBlast: assisting the analysis of conserved synteny information.Sympatric ecological speciation meets pyrosequencing: sampling the transcriptome of the apple maggot Rhagoletis pomonella Sequence-structure-function relations of the mosquito leucine-rich repeat immune proteins.DODO: an efficient orthologous genes assignment tool based on domain architectures. Domain based ortholog detection.OrthoInspector: comprehensive orthology analysis and visual exploration.Gene-oriented ortholog database: a functional comparison platform for orthologous loci.Semaphorin-1a is required for Aedes aegypti embryonic nerve cord development.A remarkably stable TipE gene cluster: evolution of insect Para sodium channel auxiliary subunits.QuartetS-DB: a large-scale orthology database for prokaryotes and eukaryotes inferred by evolutionary evidence.Mosquito genomics. Highly evolvable malaria vectors: the genomes of 16 Anopheles mosquitoes.OrthoDB v9.1: cataloging evolutionary and functional annotations for animal, fungal, plant, archaeal, bacterial and viral orthologs Discovery and annotation of small proteins using genomics, proteomics, and computational approaches.Evolutionary rate patterns of genes involved in the Drosophila Toll and Imd signaling pathway.Stage 0 sporulation gene A as a molecular marker to study diversity of endospore-forming Firmicutes.Genomics of ecological adaptation in cactophilic Drosophila.Identifying single copy orthologs in Metazoa.Efficient large-scale protein sequence comparison and gene matching to identify orthologs and co-orthologs Quantification of ortholog losses in insects and vertebrates.Evolutionary Conservation of a GPCR-Independent Mechanism of Trimeric G Protein Activation The Simple Chordate Ciona intestinalis Has a Reduced Complement of Genes Associated with Fanconi Anemia.Comparative Expression Dynamics of Intergenic Long Noncoding RNAs in the Genus Drosophila.

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OrthoDB: the hierarchical catalog of eukaryotic orthologs

http://www.wikidata.org/entity/Q24650129

description

2008 nî lūn-bûn

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2008 թուականի Յունուարին հրատարակուած գիտական յօդուած

@hyw

2008 թվականի հունվարին հրատարակված գիտական հոդված

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2008年の論文

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2008年論文

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2008年論文

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2008年論文

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2008年論文

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2008年論文

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2008年论文

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name

OrthoDB: the hierarchical catalog of eukaryotic orthologs

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OrthoDB: the hierarchical catalog of eukaryotic orthologs

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OrthoDB: the hierarchical catalog of eukaryotic orthologs

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type

label

OrthoDB: the hierarchical catalog of eukaryotic orthologs

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OrthoDB: the hierarchical catalog of eukaryotic orthologs

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OrthoDB: the hierarchical catalog of eukaryotic orthologs

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OrthoDB: the hierarchical catalog of eukaryotic orthologs

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OrthoDB: the hierarchical catalog of eukaryotic orthologs

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OrthoDB: the hierarchical catalog of eukaryotic orthologs

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Nucleic Acids Research

P1476

OrthoDB: the hierarchical catalog of eukaryotic orthologs

@en

P2093

Evgenia V Kriventseva

http://www.w3.org/2001/XMLSchema#string

Evgeny M Zdobnov

http://www.w3.org/2001/XMLSchema#string

Nazim Rahman

http://www.w3.org/2001/XMLSchema#string

Octavio Espinosa

http://www.w3.org/2001/XMLSchema#string

P2860

MUSCLE: a multiple sequence alignment method with reduced time and space complexity

The COG database: an updated version includes eukaryotes

Insights into social insects from the genome of the honeybee Apis mellifera

OrthoMCL-DB: querying a comprehensive multi-species collection of ortholog groups.

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

Inparanoid: a comprehensive database of eukaryotic orthologs

Amino acid substitution matrices from protein blocks

Evolutionary dynamics of immune-related genes and pathways in disease-vector mosquitoes

Orthology prediction at scalable resolution by phylogenetic tree analysis

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D271-5

http://www.w3.org/2001/XMLSchema#string

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scholarly article

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1012818

http://www.w3.org/2001/XMLSchema#string

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10.1093/NAR/GKM845

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Database issue

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36

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2008-01-01T00:00:00Z

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17947323

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2238902

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