Assessment of CAPRI predictions in rounds 3-5 shows progress in docking procedures
about
Toward high-resolution homology modeling of antibody Fv regions and application to antibody-antigen dockingConsensus scoring for enriching near-native structures from protein-protein docking decoysMembrane protein prediction methodsFastContact: a free energy scoring tool for protein-protein complex structuresMolecular docking as a popular tool in drug design, an in silico travelSampling and scoring: a marriage made in heavenAn Integrated Framework Advancing Membrane Protein Modeling and DesignMechanism of enzymatic reaction and protein-protein interactions of PLD from a 3D structural model.ATTRACT-EM: a new method for the computational assembly of large molecular machines using cryo-EM mapsStructural Insight into the Mechanisms of Wnt Signaling Antagonism by DkkSnugDock: paratope structural optimization during antibody-antigen docking compensates for errors in antibody homology modelsProtein docking by the underestimation of free energy funnels in the space of encounter complexesPredicting weakly stable regions, oligomerization state, and protein-protein interfaces in transmembrane domains of outer membrane proteins.Exploring protein interfaces with a general photochemical reagent.Factors influencing the energetics of electron and proton transfers in proteins. What can be learned from calculations.Near-native structure refinement using in vacuo energy minimization.3Drefine: an interactive web server for efficient protein structure refinement.Fragment-based modelling of single stranded RNA bound to RNA recognition motif containing proteins.A novel method for protein-protein interaction site prediction using phylogenetic substitution models.3Drefine: consistent protein structure refinement by optimizing hydrogen bonding network and atomic-level energy minimization.Protein-DNA docking with a coarse-grained force field.Cryo-EM Data Are Superior to Contact and Interface Information in Integrative Modeling.Macromolecular recognition in the Protein Data Bank.Docking protein domains in contact space.Recognizing protein-protein interfaces with empirical potentials and reduced amino acid alphabetsM-TASSER: an algorithm for protein quaternary structure predictionThe size of the intermolecular energy funnel in protein-protein interactions.Molecular dynamics simulations to gain insights into the stability and morphologies of K3 oligomers from beta2-microglobulin.From nonspecific DNA-protein encounter complexes to the prediction of DNA-protein interactions.Pushing structural information into the yeast interactome by high-throughput protein docking experimentsFRODOCK: a new approach for fast rotational protein-protein docking.Identification of structural mechanisms of HIV-1 protease specificity using computational peptide docking: implications for drug resistance.Optimization of minimum set of protein-DNA interactions: a quasi exact solution with minimum over-fittingDiscrimination of near-native structures in protein-protein docking by testing the stability of local minima.Extending RosettaDock with water, sugar, and pH for prediction of complex structures and affinities for CAPRI rounds 20-27Predicting protein-DNA interactions by full search computational docking.A collaborative filtering approach for protein-protein docking scoring functions.Protein-protein complex structure predictions by multimeric threading and template recombinationProtein docking prediction using predicted protein-protein interface.An integrated suite of fast docking algorithms.
P2860
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P2860
Assessment of CAPRI predictions in rounds 3-5 shows progress in docking procedures
description
2005 nî lūn-bûn
@nan
2005 թուականի Օգոստոսին հրատարակուած գիտական յօդուած
@hyw
2005 թվականի օգոստոսին հրատարակված գիտական հոդված
@hy
2005年の論文
@ja
2005年論文
@yue
2005年論文
@zh-hant
2005年論文
@zh-hk
2005年論文
@zh-mo
2005年論文
@zh-tw
2005年论文
@wuu
name
Assessment of CAPRI predictions in rounds 3-5 shows progress in docking procedures
@ast
Assessment of CAPRI predictions in rounds 3-5 shows progress in docking procedures
@en
Assessment of CAPRI predictions in rounds 3-5 shows progress in docking procedures
@nl
type
label
Assessment of CAPRI predictions in rounds 3-5 shows progress in docking procedures
@ast
Assessment of CAPRI predictions in rounds 3-5 shows progress in docking procedures
@en
Assessment of CAPRI predictions in rounds 3-5 shows progress in docking procedures
@nl
prefLabel
Assessment of CAPRI predictions in rounds 3-5 shows progress in docking procedures
@ast
Assessment of CAPRI predictions in rounds 3-5 shows progress in docking procedures
@en
Assessment of CAPRI predictions in rounds 3-5 shows progress in docking procedures
@nl
P3181
P356
P1433
P1476
Assessment of CAPRI predictions in rounds 3-5 shows progress in docking procedures
@en
P2093
Raphaël Leplae
Raúl Méndez
P304
P3181
P356
10.1002/PROT.20551
P407
P577
2005-08-01T00:00:00Z