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Sequence co-evolution gives 3D contacts and structures of protein complexesSequence co-evolutionary information is a natural partner to minimally-frustrated models of biomolecular dynamicsComputational prediction of protein interfaces: A review of data driven methodsMetabolomics and systems pharmacology: why and how to model the human metabolic network for drug discoveryAn Integrated Framework Advancing Membrane Protein Modeling and DesignGDFuzz3D: a method for protein 3D structure reconstruction from contact maps, based on a non-Euclidean distance functionConserved-residue mutations in Wzy affect O-antigen polymerization and Wzz-mediated chain-length regulation in Pseudomonas aeruginosa PAO1Structure, dynamics and implied gating mechanism of a human cyclic nucleotide-gated channelLarge-Scale Conformational Transitions and Dimerization Are Encoded in the Amino-Acid Sequences of Hsp70 ChaperonesEvolution-Based Functional Decomposition of ProteinsComparison of Algorithms for Prediction of Protein Structural Features from Evolutionary DataProtein structure determination by combining sparse NMR data with evolutionary couplingsAmino acid coevolution reveals three-dimensional structure and functional domains of insect odorant receptorsPconsFold: improved contact predictions improve protein modelsFreeContact: fast and free software for protein contact prediction from residue co-evolutionEvaluation of residue-residue contact prediction in CASP10Constructing sequence-dependent protein models using coevolutionary information.Predicting functionally informative mutations in Escherichia coli BamA using evolutionary covariance analysis.Network deconvolution as a general method to distinguish direct dependencies in networksBCov: a method for predicting β-sheet topology using sparse inverse covariance estimation and integer programming.H2rs: deducing evolutionary and functionally important residue positions by means of an entropy and similarity based analysis of multiple sequence alignments.Exploring the speed and performance of molecular replacement with AMPLE using QUARK ab initio protein models.Prediction of protein structural features from sequence data based on Shannon entropy and Kolmogorov complexity.The observation of evolutionary interaction pattern pairs in membrane proteins.Determining protein structures by combining semireliable data with atomistic physical models by Bayesian inferenceAccurate contact predictions using covariation techniques and machine learning.Assessment of the utility of contact-based restraints in accelerating the prediction of protein structure using molecular dynamics simulations.Large-scale determination of previously unsolved protein structures using evolutionary informationUsing de novo protein structure predictions to measure the quality of very large multiple sequence alignments.Contact-assisted protein structure modeling by global optimization in CASP11.Combining Evolutionary Information and an Iterative Sampling Strategy for Accurate Protein Structure Prediction.CoeViz: a web-based tool for coevolution analysis of protein residues.3D RNA and Functional Interactions from Evolutionary CouplingsPrediction of homoprotein and heteroprotein complexes by protein docking and template-based modeling: A CASP-CAPRI experimentComputational modeling of Repeat1 region of INI1/hSNF5: An evolutionary link with ubiquitin.CMsearch: simultaneous exploration of protein sequence space and structure space improves not only protein homology detection but also protein structure predictionResidue contacts predicted by evolutionary covariance extend the application of ab initio molecular replacement to larger and more challenging protein folds.A large-scale comparative assessment of methods for residue-residue contact prediction.Blind protein structure prediction using accelerated free-energy simulationsPotts Hamiltonian models of protein co-variation, free energy landscapes, and evolutionary fitness.
P2860
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P2860
description
2012 nî lūn-bûn
@nan
2012 թուականի Նոյեմբերին հրատարակուած գիտական յօդուած
@hyw
2012 թվականի նոյեմբերին հրատարակված գիտական հոդված
@hy
2012年の論文
@ja
2012年論文
@yue
2012年論文
@zh-hant
2012年論文
@zh-hk
2012年論文
@zh-mo
2012年論文
@zh-tw
2012年论文
@wuu
name
Protein structure prediction from sequence variation
@ast
Protein structure prediction from sequence variation
@en
type
label
Protein structure prediction from sequence variation
@ast
Protein structure prediction from sequence variation
@en
prefLabel
Protein structure prediction from sequence variation
@ast
Protein structure prediction from sequence variation
@en
P2860
P921
P3181
P356
P1433
P1476
Protein structure prediction from sequence variation
@en
P2093
Thomas A Hopf
P2860
P2888
P304
P3181
P356
10.1038/NBT.2419
P407
P577
2012-11-01T00:00:00Z