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The CATH database: an extended protein family resource for structural and functional genomics

The CATH database: an extended protein family resource for structural and functional genomics

http://www.wikidata.org/entity/Q30332391

about

An integrative genomic approach to uncover molecular mechanisms of prokaryotic traits A gold standard set of mechanistically diverse enzyme superfamilies.TOPSAN: a collaborative annotation environment for structural genomics BIOVERSE: enhancements to the framework for structural, functional and contextual modeling of proteins and proteomes.The Pfam protein families database Clustering the annotation space of proteins Progress towards mapping the universe of protein folds Practical lessons from protein structure prediction.Urzymology: experimental access to a key transition in the appearance of enzymes Structure of aspartoacylase, the brain enzyme impaired in Canavan disease The Complex of Sphingomonas elodea ATCC 31461 Glucose-1-Phosphate Uridylyltransferase with Glucose-1-Phosphate Reveals a Novel Quaternary Structure, Unique among Nucleoside Diphosphate-Sugar Pyrophosphorylase Members Solution structure of the hypothetical protein TA0095 fromThermoplasma acidophilum: A novel superfamily with a two-layer sandwich architecture Structure of glycerol-3-phosphate dehydrogenase, an essential monotopic membrane enzyme involved in respiration and metabolism.Structural and functional characterization of a novel phosphatase from the Arabidopsis thaliana gene locus At1g05000 The crystal structure and dimerization interface of GADD45γ X-ray structure of ILL2, an auxin-conjugate amidohydrolase fromArabidopsis thaliana The solution structure of the amino-terminal domain of human DNA polymerase subunit B is homologous to C-domains of AAA+ proteins Structure of Human J-type Co-chaperone HscB Reveals a Tetracysteine Metal-binding Domain Structural insights into the evolution of a sexy protein: novel topology and restricted backbone flexibility in a hypervariable pheromone from the red-legged salamander, Plethodon shermani Structures of Anabaena calcium-binding protein CcbP: insights into Ca2+ signaling during heterocyst differentiation.Tools for comparative protein structure modeling and analysis Integrated databanks access and sequence/structure analysis services at the PBIL.The evolution of protein structures and structural ensembles under functional constraint.Exploring representations of protein structure for automated remote homology detection and mapping of protein structure space ProSMoS server: a pattern-based search using interaction matrix representation of protein structures The value of protein structure classification information-Surveying the scientific literature.Efficient SCOP-fold classification and retrieval using index-based protein substructure alignments.Structural relationships among proteins with different global topologies and their implications for function annotation strategies FragBag, an accurate representation of protein structure, retrieves structural neighbors from the entire PDB quickly and accurately.CASP11--An Evaluation of a Modular BCL::Fold-Based Protein Structure Prediction Pipeline.A benchmark testing ground for integrating homology modeling and protein docking.Solenoid and non-solenoid protein recognition using stationary wavelet packet transform.Exploring protein dynamics space: the dynasome as the missing link between protein structure and function.Computational methods for constructing protein structure models from 3D electron microscopy maps.Quantitative criteria for native energetic heterogeneity influences in the prediction of protein folding kinetics Blast sampling for structural and functional analyses.Preservation of protein clefts in comparative models.A fast SCOP fold classification system using content-based E-Predict algorithm.De-orphaning the structural proteome through reciprocal comparison of evolutionarily important structural features Sequence similarity network reveals common ancestry of multidomain proteins.

P2860

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P2860

The CATH database: an extended protein family resource for structural and functional genomics

http://www.wikidata.org/entity/Q30332391

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2003 nî lūn-bûn

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2003 թուականի Յունուարին հրատարակուած գիտական յօդուած

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2003年の論文

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2003年論文

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The CATH database: an extended ...... ctural and functional genomics

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The CATH database: an extended ...... ctural and functional genomics

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Nucleic Acids Research

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The CATH database: an extended ...... ctural and functional genomics

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A P Harrison

http://www.w3.org/2001/XMLSchema#string

C A Orengo

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C F Bennett

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N Martin

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P2860

Domain assignment for protein structures using a consensus approach: characterization and analysis

CATH--a hierarchic classification of protein domain structures

Parser for protein folding units

A new approach to protein fold recognition

Protein structure alignment

Hidden Markov models for detecting remote protein homologies

Evolution of function in protein superfamilies, from a structural perspective.

Use of techniques derived from graph theory to compare secondary structure motifs in proteins.

Predicting protein structure using hidden Markov models.

The estimation of statistical parameters for local alignment score distributions.

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452-455

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scholarly article

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10.1093/NAR/GKG062

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1

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31

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Frances M. G. Pearl

Adrian Shepherd

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2003-01-01T00:00:00Z

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277529576

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12520050

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165509

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