Dead-end elimination with perturbations (DEEPer): a provable protein design algorithm with continuous sidechain and backbone flexibility.
about
Exposing Hidden Alternative Backbone Conformations in X-ray Crystallography Using qFitcomets (Constrained Optimization of Multistate Energies by Tree Search): A Provable and Efficient Protein Design Algorithm to Optimize Binding Affinity and Specificity with Respect to Sequence.LUTE (Local Unpruned Tuple Expansion): Accurate Continuously Flexible Protein Design with General Energy Functions and Rigid Rotamer-Like Efficiency.Parallel Computational Protein Design.OSPREY: protein design with ensembles, flexibility, and provable algorithms.Computational design of protein-small molecule interfaces.De novo design of a transmembrane Zn²⁺-transporting four-helix bundle.Protein engineering by highly parallel screening of computationally designed variants.CADEE: Computer-Aided Directed Evolution of Enzymes.A critical analysis of computational protein design with sparse residue interaction graphs.BWM*: A Novel, Provable, Ensemble-based Dynamic Programming Algorithm for Sparse Approximations of Computational Protein Design.Toward high-resolution computational design of the structure and function of helical membrane proteinsImproving computational efficiency and tractability of protein design using a piecemeal approach. A strategy for parallel and distributed protein design.Computational design gains momentum in enzyme catalysis engineering.Synthetic biology for the directed evolution of protein biocatalysts: navigating sequence space intelligently.Data driven flexible backbone protein design.OSPREY Predicts Resistance Mutations Using Positive and Negative Computational Protein Design.Algorithms for protein design.Deterministic Search Methods for Computational Protein Design.Fast search algorithms for computational protein design.Energy Minimization of Discrete Protein Titration State Models Using Graph Theory.cOSPREY: A Cloud-Based Distributed Algorithm for Large-Scale Computational Protein Design.Variability of the Cyclin-Dependent Kinase 2 Flexibility Without Significant Change in the Initial Conformation of the Protein or Its Environment; a Computational Study.Improved energy bound accuracy enhances the efficiency of continuous protein design.Compact Representation of Continuous Energy Surfaces for More Efficient Protein Design.Fast gap-free enumeration of conformations and sequences for protein design.CATS (Coordinates of Atoms by Taylor Series): protein design with backbone flexibility in all locally feasible directions.BBK* (Branch and Bound Over K*): A Provable and Efficient Ensemble-Based Protein Design Algorithm to Optimize Stability and Binding Affinity Over Large Sequence Spaces.iCFN: an efficient exact algorithm for multistate protein design
P2860
Q28269138-E47944AD-D310-4CA1-BF26-3FEE969C62E0Q30383489-5E62EE6D-48DC-4F32-8B31-54D80040393CQ30393514-36E13FBD-FE39-499B-B50E-620107F84E43Q30395958-E88B05FB-0A24-44E3-B39C-001D37B1BEABQ34328545-07438E4D-C2F6-4A5A-A78A-8958286EF23AQ34959454-8B56225C-6C4F-4327-B567-96B472A239EDQ35456726-3E6776DD-E7FA-46CF-B08C-1BB547B3CA58Q36084378-A51DC182-B97F-4196-A0DE-58CE8FFD8BD3Q36294688-130E68DE-043C-4490-9811-CB16537417CBQ36328057-3D0CB7A5-5DDF-4AE0-BA39-05D5CD649DCBQ36996055-7D121DBE-9A29-44E6-AA85-BCC7A93094B5Q37128527-B9581574-D00E-45F8-B026-A706924A8597Q37695442-30E1DE31-6A7B-4296-AB67-332C0A11DEFBQ38104437-374DF2D7-F1EB-4E75-9174-E42EFF4248E3Q38287400-BD167295-4F58-4F6C-A540-AB3CCA00A9D7Q38610135-FDEBC71C-CA39-47B3-B523-0CEC78D5FD1FQ38787688-5567E391-060D-4564-8D31-B16BFA2ECD9FQ38810159-2C320AEB-A59E-4C93-AFFC-C4F3D23118F5Q39028184-63773228-BD53-4EB2-A656-7FCB2A8CBFDAQ40053999-5F929F1C-FEE6-4553-950A-0E9F6AD1E442Q40958972-D683EDE6-D888-4B50-B112-8454FF4BC950Q41626450-E869719E-B43C-4B74-977F-8D2B90247D1BQ41674198-903100F0-08E2-4939-B358-19A9BC29F715Q42091603-296FABBF-AF4C-4069-B7BD-7F5F970BC168Q42429820-5AD1A3E7-4C40-479B-9432-017A9903A2FBQ42695246-E7C0318E-4C70-4224-AE71-732A808AAE9FQ42697203-13459DF0-E37C-47BA-8C84-0C6C07AE5837Q52594333-96EDFF2F-FF7A-4142-B4F2-6DBF667B7897Q58757851-30BFB030-F464-46E5-8D5E-62DF4F35704B
P2860
Dead-end elimination with perturbations (DEEPer): a provable protein design algorithm with continuous sidechain and backbone flexibility.
description
2012 nî lūn-bûn
@nan
2012 թուականի Սեպտեմբերին հրատարակուած գիտական յօդուած
@hyw
2012 թվականի սեպտեմբերին հրատարակված գիտական հոդված
@hy
2012年の論文
@ja
2012年論文
@yue
2012年論文
@zh-hant
2012年論文
@zh-hk
2012年論文
@zh-mo
2012年論文
@zh-tw
2012年论文
@wuu
name
Dead-end elimination with pert ...... hain and backbone flexibility.
@ast
Dead-end elimination with pert ...... hain and backbone flexibility.
@en
type
label
Dead-end elimination with pert ...... hain and backbone flexibility.
@ast
Dead-end elimination with pert ...... hain and backbone flexibility.
@en
prefLabel
Dead-end elimination with pert ...... hain and backbone flexibility.
@ast
Dead-end elimination with pert ...... hain and backbone flexibility.
@en
P2860
P356
P1433
P1476
Dead-end elimination with pert ...... hain and backbone flexibility.
@en
P2093
Bruce R Donald
Mark A Hallen
P2860
P356
10.1002/PROT.24150
P407
P577
2012-09-18T00:00:00Z