Molecular dynamics simulations of RNA kissing-loop motifs reveal structural dynamics and formation of cation-binding pockets.
about
Molecular dynamics simulations of sarcin-ricin rRNA motif.The Conformational Landscape of the Ribosomal Protein S15 and Its Influence on the Protein Interaction with 16S RNAComputational exploration of mobile ion distributions around RNA duplexLong-residency hydration, cation binding, and dynamics of loop E/helix IV rRNA-L25 protein complex.Dynamics of the base of ribosomal A-site finger revealed by molecular dynamics simulations and Cryo-EMHinge-like motions in RNA kink-turns: the role of the second a-minor motif and nominally unpaired basesMolecular simulation studies of monovalent counterion-mediated interactions in a model RNA kissing loop.Cations and hydration in catalytic RNA: molecular dynamics of the hepatitis delta virus ribozymeTrapped water molecules are essential to structural dynamics and function of a ribozyme.Elastic properties of ribosomal RNA building blocks: molecular dynamics of the GTPase-associated center rRNAMolecular dynamics simulations of RNA: an in silico single molecule approach.Extended molecular dynamics of a c-kit promoter quadruplex.Conformations of flanking bases in HIV-1 RNA DIS kissing complexes studied by molecular dynamics.RNA dimerization plays a role in ribosomal frameshifting of the SARS coronavirus.Direct evidence for RNA-RNA interactions at the 3' end of the Hepatitis C virus genome using surface plasmon resonanceTheoretical studies of RNA catalysis: hybrid QM/MM methods and their comparison with MD and QM.Molecular dynamics simulation study of the binding of purine bases to the aptamer domain of the guanine sensing riboswitchDNA and its counterions: a molecular dynamics study.Exploring the counterion atmosphere around DNA: what can be learned from molecular dynamics simulations?Resolving fast and slow motions in the internal loop containing stem-loop 1 of HIV-1 that are modulated by Mg2+ binding: role in the kissing-duplex structural transition.Interactions of cations with RNA loop-loop complexes.The snRNP 15.5K protein folds its cognate K-turn RNA: a combined theoretical and biochemical study.The role of salt concentration and magnesium binding in HIV-1 subtype-A and subtype-B kissing loop monomer structures.RNA Structural Dynamics As Captured by Molecular Simulations: A Comprehensive Overview.Electrostatics Explains the Position-Dependent Effect of G⋅U Wobble Base Pairs on the Affinity of RNA Kissing Complexes.The effect of topology on the structure and free energy landscape of DNA kissing complexes.
P2860
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P2860
Molecular dynamics simulations of RNA kissing-loop motifs reveal structural dynamics and formation of cation-binding pockets.
description
2003 nî lūn-bûn
@nan
2003 թուականի Դեկտեմբերին հրատարակուած գիտական յօդուած
@hyw
2003 թվականի դեկտեմբերին հրատարակված գիտական հոդված
@hy
2003年の論文
@ja
2003年論文
@yue
2003年論文
@zh-hant
2003年論文
@zh-hk
2003年論文
@zh-mo
2003年論文
@zh-tw
2003年论文
@wuu
name
Molecular dynamics simulations ...... ion of cation-binding pockets.
@ast
Molecular dynamics simulations ...... ion of cation-binding pockets.
@en
type
label
Molecular dynamics simulations ...... ion of cation-binding pockets.
@ast
Molecular dynamics simulations ...... ion of cation-binding pockets.
@en
prefLabel
Molecular dynamics simulations ...... ion of cation-binding pockets.
@ast
Molecular dynamics simulations ...... ion of cation-binding pockets.
@en
P2093
P2860
P356
P1476
Molecular dynamics simulations ...... ion of cation-binding pockets.
@en
P2093
Judit E Sponer
Kamila Réblová
Nad'a Spacková
P2860
P304
P356
10.1093/NAR/GKG880
P407
P577
2003-12-01T00:00:00Z