NNDB: the nearest neighbor parameter database for predicting stability of nucleic acid secondary structure.
about
The 3' splice site of influenza A segment 7 mRNA can exist in two conformations: a pseudoknot and a hairpinGenome-wide analyses of Epstein-Barr virus reveal conserved RNA structures and a novel stable intronic sequence RNAIFNL3 mRNA structure is remodeled by a functional non-coding polymorphism associated with hepatitis C virus clearanceViennaRNA Package 2.0A weighted sampling algorithm for the design of RNA sequences with targeted secondary structure and nucleotide distributionMultilign: an algorithm to predict secondary structures conserved in multiple RNA sequencesSingle-Molecule Imaging Reveals that Argonaute Reshapes the Binding Properties of Its Nucleic Acid GuidesThe DEAD-box protein Dbp2 functions with the RNA-binding protein Yra1 to promote mRNP assembly.Integrating chemical footprinting data into RNA secondary structure predictionA parallel implementation of the Wuchty algorithm with additional experimental filters to more thoroughly explore RNA conformational spaceRich RNA Structure Landscapes Revealed by Mutate-and-Map AnalysisSelf-Folding of Naked Segment 8 Genomic RNA of Influenza A VirusNetwork Properties of the Ensemble of RNA StructuresDiscovery of Novel ncRNA Sequences in Multiple Genome Alignments on the Basis of Conserved and Stable Secondary StructuresFast, approximate kinetics of RNA foldingComplete RNA inverse folding: computational design of functional hammerhead ribozymesUsing structural and evolutionary information to detect and correct pyrosequencing errors in noncoding RNAsGlobal or local? Predicting secondary structure and accessibility in mRNAsThermodynamic characterization of the Saccharomyces cerevisiae telomerase RNA pseudoknot domain in vitroDifferences between cotranscriptional and free riboswitch foldingMechanistic insights into temperature-dependent regulation of the simple cyanobacterial hsp17 RNA thermometer at base-pair resolution.Mirinho: An efficient and general plant and animal pre-miRNA predictor for genomic and deep sequencing dataAnalysis of sequencing data for probing RNA secondary structures and protein-RNA binding in studying posttranscriptional regulations.Molecular detection of a novel totivirus from golden shiner (Notemigonus crysoleucas) baitfish in the USA.Evolutionary Algorithm for RNA Secondary Structure Prediction Based on Simulated SHAPE Data.Regulation of Isoflavone Biosynthesis by miRNAs in Two Contrasting Soybean Genotypes at Different Seed Developmental Stages.In Vivo Characterization of an AHR-Dependent Long Noncoding RNA Required for Proper Sox9b Expression.A sensitivity analysis of RNA folding nearest neighbor parameters identifies a subset of free energy parameters with the greatest impact on RNA secondary structure prediction.From structure prediction to genomic screens for novel non-coding RNAs.Enhanced product stability in the hammerhead ribozyme.RNAiFold2T: Constraint Programming design of thermo-IRES switches.Secondary structure of a conserved domain in an intron of influenza A M1 mRNASHAPE-directed RNA secondary structure prediction.MELTING, a flexible platform to predict the melting temperatures of nucleic acidsGTfold: enabling parallel RNA secondary structure prediction on multi-core desktopsMathematical tools to optimize the design of oligonucleotide probes and primers.RNAiFold 2.0: a web server and software to design custom and Rfam-based RNA molecules.IntaRNA 2.0: enhanced and customizable prediction of RNA-RNA interactions.Self-assembling RNA nanorings based on RNAI/II inverse kissing complexes.Profiling small RNA reveals multimodal substructural signals in a Boltzmann ensemble.
P2860
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P2860
NNDB: the nearest neighbor parameter database for predicting stability of nucleic acid secondary structure.
description
2009 nî lūn-bûn
@nan
2009 թուականի Հոկտեմբերին հրատարակուած գիտական յօդուած
@hyw
2009 թվականի հոտեմբերին հրատարակված գիտական հոդված
@hy
2009年の論文
@ja
2009年論文
@yue
2009年論文
@zh-hant
2009年論文
@zh-hk
2009年論文
@zh-mo
2009年論文
@zh-tw
2009年论文
@wuu
name
NNDB: the nearest neighbor par ...... leic acid secondary structure.
@ast
NNDB: the nearest neighbor par ...... leic acid secondary structure.
@en
type
label
NNDB: the nearest neighbor par ...... leic acid secondary structure.
@ast
NNDB: the nearest neighbor par ...... leic acid secondary structure.
@en
prefLabel
NNDB: the nearest neighbor par ...... leic acid secondary structure.
@ast
NNDB: the nearest neighbor par ...... leic acid secondary structure.
@en
P2860
P356
P1476
NNDB: the nearest neighbor par ...... leic acid secondary structure.
@en
P2093
David H Mathews
P2860
P304
P356
10.1093/NAR/GKP892
P407
P433
Database issue
P577
2009-10-30T00:00:00Z