Estimation of alternative splicing isoform frequencies from RNA-Seq data
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Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and CufflinksIn the spotlight: BioinformaticsAn optimized protocol for generation and analysis of Ion Proton sequencing reads for RNA-SeqDifferential analysis of gene regulation at transcript resolution with RNA-seqiReckon: simultaneous isoform discovery and abundance estimation from RNA-seq dataA robust method for transcript quantification with RNA-seq data.Modeling alternative splicing variants from RNA-Seq data with isoform graphs.Transcriptome assembly and quantification from Ion Torrent RNA-Seq data.Measuring differential gene expression with RNA-seq: challenges and strategies for data analysis.RNA-seq Data: Challenges in and Recommendations for Experimental Design and Analysis.Comparative assessment of methods for the computational inference of transcript isoform abundance from RNA-seq data.Effects of subsampling on characteristics of RNA-seq data from triple-negative breast cancer patients.EMSAR: estimation of transcript abundance from RNA-seq data by mappability-based segmentation and reclusteringBenchmark analysis of algorithms for determining and quantifying full-length mRNA splice forms from RNA-seq dataQuickRNASeq lifts large-scale RNA-seq data analyses to the next level of automation and interactive visualization.A Markov random field-based approach for joint estimation of differentially expressed genes in mouse transcriptome data.Statistical modeling of isoform splicing dynamics from RNA-seq time series data.Network-based bioinformatics analysis of spatio-temporal RNA-Seq data reveals transcriptional programs underpinning normal and aberrant retinal development.Gene and isoform expression signatures associated with tumor stage in kidney renal clear cell carcinomaEndocannabinoid system acts as a regulator of immune homeostasis in the gut.RNA-Skim: a rapid method for RNA-Seq quantification at transcript level.Sailfish enables alignment-free isoform quantification from RNA-seq reads using lightweight algorithmsImproving RNA-Seq expression estimates by correcting for fragment bias.Exploring the gonad transcriptome of two extreme male pigs with RNA-seqEvaluation of the coverage and depth of transcriptome by RNA-Seq in chickens.A normalization strategy for comparing tag count data.RNA-Seq mapping and detection of gene fusions with a suffix array algorithm.RNA-Seq alignment to individualized genomes improves transcript abundance estimates in multiparent populations.Challenges in estimating percent inclusion of alternatively spliced junctions from RNA-seq data.A context-based approach to identify the most likely mapping for RNA-seq experiments.Bootstrap-based differential gene expression analysis for RNA-Seq data with and without replicatesTowards the integration, annotation and association of historical microarray experiments with RNA-seqIAOseq: inferring abundance of overlapping genes using RNA-seq dataSpliceDisease database: linking RNA splicing and diseaseNeurotranscriptomics: The Effects of Neonatal Stimulus Deprivation on the Rat Pineal TranscriptomeTranscriptome analysis of Brassica napus pod using RNA-Seq and identification of lipid-related candidate genes.Union Exon Based Approach for RNA-Seq Gene Quantification: To Be or Not to Be?Deciphering the plant splicing code: experimental and computational approaches for predicting alternative splicing and splicing regulatory elementsEmpirical assessment of analysis workflows for differential expression analysis of human samples using RNA-SeqCIDANE: comprehensive isoform discovery and abundance estimation
P2860
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P2860
Estimation of alternative splicing isoform frequencies from RNA-Seq data
description
2011 nî lūn-bûn
@nan
2011 թուականի Ապրիլին հրատարակուած գիտական յօդուած
@hyw
2011 թվականի ապրիլին հրատարակված գիտական հոդված
@hy
2011年の論文
@ja
2011年論文
@yue
2011年論文
@zh-hant
2011年論文
@zh-hk
2011年論文
@zh-mo
2011年論文
@zh-tw
2011年论文
@wuu
name
Estimation of alternative splicing isoform frequencies from RNA-Seq data
@ast
Estimation of alternative splicing isoform frequencies from RNA-Seq data
@en
type
label
Estimation of alternative splicing isoform frequencies from RNA-Seq data
@ast
Estimation of alternative splicing isoform frequencies from RNA-Seq data
@en
prefLabel
Estimation of alternative splicing isoform frequencies from RNA-Seq data
@ast
Estimation of alternative splicing isoform frequencies from RNA-Seq data
@en
P2860
P356
P1476
Estimation of alternative splicing isoform frequencies from RNA-Seq data
@en
P2093
Marius Nicolae
Serghei Mangul
P2860
P2888
P356
10.1186/1748-7188-6-9
P577
2011-04-19T00:00:00Z
P5875
P6179
1035358650