A novel method for detecting intramolecular coevolution: adding a further dimension to selective constraints analyses.
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Disentangling direct from indirect co-evolution of residues in protein alignmentsIntegrated analysis of residue coevolution and protein structure in ABC transportersEvolutionary modeling of rate shifts reveals specificity determinants in HIV-1 subtypesPervasive cryptic epistasis in molecular evolutionPrevalence of epistasis in the evolution of influenza A surface proteinsPrediction of contact residue pairs based on co-substitution between sites in protein structuresMolecular evolution of rbcL in three gymnosperm families: identifying adaptive and coevolutionary patternsMolecular evolution of the vertebrate TLR1 gene family--a complex history of gene duplication, gene conversion, positive selection and co-evolutionDifferential Strengths of Positive Selection Revealed by Hitchhiking Effects at Small Physical Scales in Drosophila melanogasterEmerging Computational Methods for the Rational Discovery of Allosteric Drugs.Reducing the false positive rate in the non-parametric analysis of molecular coevolution.Correction for phylogeny, small number of observations and data redundancy improves the identification of coevolving amino acid pairs using mutual information.Characterizing the Diverse Mutational Pathways Associated with R5-Tropic Maraviroc Resistance: HIV-1 That Uses the Drug-Bound CCR5 Coreceptor.CoeViz: a web-based tool for coevolution analysis of protein residues.Correlated mutations via regularized multinomial regression.Sequence coevolution between RNA and protein characterized by mutual information between residue tripletsProtein sequence alignment analysis by local covariation: coevolution statistics detect benchmark alignment errors.Detecting coevolution in and among protein domainsAn evolutionary-network model reveals stratified interactions in the V3 loop of the HIV-1 envelope.Detecting groups of coevolving positions in a molecule: a clustering approachCorrelated mutation analysis on the catalytic domains of serine/threonine protein kinases.A combinatorial approach to detect coevolved amino acid networks in protein families of variable divergence.Pairwise and higher-order correlations among drug-resistance mutations in HIV-1 subtype B protease.Two frequenins in Drosophila: unveiling the evolutionary history of an unusual neuronal calcium sensor (NCS) duplicationIdentifying and seeing beyond multiple sequence alignment errors using intra-molecular protein covariationMutational dynamics of murine angiogenin duplicates.Conserved and variable correlated mutations in the plant MADS protein network.Delineation of plant caleosin residues critical for functional divergence, positive selection and coevolutionSequence motifs in MADS transcription factors responsible for specificity and diversification of protein-protein interaction.Gag-protease coevolution analyses define novel structural surfaces in the HIV-1 matrix and capsid involved in resistance to Protease InhibitorsCoevolution of amino acid residues in the key photosynthetic enzyme Rubisco.Phylogeography and molecular evolution of potato virus Y.Accurate simulation and detection of coevolution signals in multiple sequence alignments.Protein fragments: functional and structural roles of their coevolution networks.The role of insulin C-peptide in the coevolution analyses of the insulin signaling pathway: a hint for its functions.A conserved mammalian protein interaction networkAn experimental and computational evolution-based method to study a mode of co-evolution of overlapping open reading frames in the AAV2 viral genome.Coevolution analyses illuminate the dependencies between amino acid sites in the chaperonin system GroES-L.Global-scale computational analysis of genomic sequences reveals the recombination pattern and coevolution dynamics of cereal-infecting geminiviruses.Bi-factor analysis based on noise-reduction (BIFANR): a new algorithm for detecting coevolving amino acid sites in proteins.
P2860
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P2860
A novel method for detecting intramolecular coevolution: adding a further dimension to selective constraints analyses.
description
2006 nî lūn-bûn
@nan
2006 թուականի Մարտին հրատարակուած գիտական յօդուած
@hyw
2006 թվականի մարտին հրատարակված գիտական հոդված
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2006年の論文
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2006年学术文章
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2006年学术文章
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2006年学术文章
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2006年学术文章
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2006年学术文章
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2006年學術文章
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name
A novel method for detecting i ...... elective constraints analyses.
@ast
A novel method for detecting i ...... elective constraints analyses.
@en
A novel method for detecting i ...... elective constraints analyses.
@nl
type
label
A novel method for detecting i ...... elective constraints analyses.
@ast
A novel method for detecting i ...... elective constraints analyses.
@en
A novel method for detecting i ...... elective constraints analyses.
@nl
prefLabel
A novel method for detecting i ...... elective constraints analyses.
@ast
A novel method for detecting i ...... elective constraints analyses.
@en
A novel method for detecting i ...... elective constraints analyses.
@nl
P2860
P1433
P1476
A novel method for detecting i ...... selective constraints analyses
@en
P2093
Simon A A Travers
P2860
P356
10.1534/GENETICS.105.053249
P407
P577
2006-03-17T00:00:00Z