MultiBind and MAPPIS: webservers for multiple alignment of protein 3D-binding sites and their interactions
about
Modeling enzyme-ligand binding in drug discoveryProtein function prediction: towards integration of similarity metrics.Geomfinder: a multi-feature identifier of similar three-dimensional protein patterns: a ligand-independent approachCreation of a free, Internet-accessible database: the Multiple Target Ligand DatabaseAlignment of distantly related protein structures: algorithm, bound and implications to homology modelingThe overlap of small molecule and protein binding sites within families of protein structuresBeauty is in the eye of the beholder: proteins can recognize binding sites of homologous proteins in more than one waySimilarities between the Binding Sites of SB-206553 at Serotonin Type 2 and Alpha7 Acetylcholine Nicotinic Receptors: Rationale for Its Polypharmacological ProfileInterolog interfaces in protein-protein dockingNothing about protein structure classification makes sense except in the light of evolution.Space-related pharma-motifs for fast search of protein binding motifs and polypharmacological targets.PCalign: a method to quantify physicochemical similarity of protein-protein interfacesIDSS: deformation invariant signatures for molecular shape comparisonA new protein binding pocket similarity measure based on comparison of clouds of atoms in 3D: application to ligand prediction.Rapid comparison of protein binding site surfaces with property encoded shape distributionsA global optimization algorithm for protein surface alignment.ProBiS algorithm for detection of structurally similar protein binding sites by local structural alignment.ProBiS: a web server for detection of structurally similar protein binding sitesTowards inferring time dimensionality in protein-protein interaction networks by integrating structures: the p53 example.PESDserv: a server for high-throughput comparison of protein binding site surfaces.Active site detection by spatial conformity and electrostatic analysis--unravelling a proteolytic function in shrimp alkaline phosphatase.Protein surface matching by combining local and global geometric information.Structural and functional analysis of multi-interface domains.Homopharma: a new concept for exploring the molecular binding mechanisms and drug repurposing.RASMOT-3D PRO: a 3D motif search webserver.Proteins comparison through probabilistic optimal structure local alignmentExploration of binding site pattern in arachidonic acid metabolizing enzymes, Cyclooxygenases and Lipoxygenases.Human proteome-scale structural modeling of E2-E3 interactions exploiting interface motifs.ProBiS-2012: web server and web services for detection of structurally similar binding sites in proteins.Normal Modes Expose Active Sites in Enzymes.A survey of available tools and web servers for analysis of protein-protein interactions and interfaces.MM-align: a quick algorithm for aligning multiple-chain protein complex structures using iterative dynamic programming.HotRegion: a database of predicted hot spot clustersHomology modeling, substrate docking, and molecular simulation studies of mycobacteriophage Che12 lysin A.
P2860
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P2860
MultiBind and MAPPIS: webservers for multiple alignment of protein 3D-binding sites and their interactions
description
2008 nî lūn-bûn
@nan
2008 թուականի Մայիսին հրատարակուած գիտական յօդուած
@hyw
2008 թվականի մայիսին հրատարակված գիտական հոդված
@hy
2008年の論文
@ja
2008年論文
@yue
2008年論文
@zh-hant
2008年論文
@zh-hk
2008年論文
@zh-mo
2008年論文
@zh-tw
2008年论文
@wuu
name
MultiBind and MAPPIS: webserve ...... g sites and their interactions
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MultiBind and MAPPIS: webserve ...... g sites and their interactions
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MultiBind and MAPPIS: webserve ...... g sites and their interactions
@nl
type
label
MultiBind and MAPPIS: webserve ...... g sites and their interactions
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MultiBind and MAPPIS: webserve ...... g sites and their interactions
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MultiBind and MAPPIS: webserve ...... g sites and their interactions
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MultiBind and MAPPIS: webserve ...... g sites and their interactions
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MultiBind and MAPPIS: webserve ...... g sites and their interactions
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MultiBind and MAPPIS: webserve ...... g sites and their interactions
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P2860
P356
P1476
MultiBind and MAPPIS: webserve ...... g sites and their interactions
@en
P2093
Alexandra Shulman-Peleg
Haim J Wolfson
P2860
P304
P356
10.1093/NAR/GKN185
P407
P433
Web Server issue
P577
2008-05-08T00:00:00Z