A mostly traditional approach improves alignment of bisulfite-converted DNA.
about
Integrating Epigenomics into the Understanding of Biomedical InsightA bioinformatician's guide to the forefront of suffix array construction algorithmsProbabilistic alignment leads to improved accuracy and read coverage for bisulfite sequencing data.MethylExtract: High-Quality methylation maps and SNV calling from whole genome bisulfite sequencing data.Evaluation of preprocessing, mapping and postprocessing algorithms for analyzing whole genome bisulfite sequencing data.Detection of differentially methylated regions from bisulfite-seq data by hidden Markov models incorporating genome-wide methylation level distributions.Estimating absolute methylation levels at single-CpG resolution from methylation enrichment and restriction enzyme sequencing methodsALP & FALP: C++ libraries for pairwise local alignment E-valuesJitterbug: somatic and germline transposon insertion detection at single-nucleotide resolution.An evaluation of methods to test predefined genomic regions for differential methylation in bisulfite sequencing data.Targeted alignment and end repair elimination increase alignment and methylation measure accuracy for reduced representation bisulfite sequencing datamethylKit: a comprehensive R package for the analysis of genome-wide DNA methylation profilesHigh-throughput sequencing of cytosine methylation in plant DNABisulfighter: accurate detection of methylated cytosines and differentially methylated regions.RNF: a general framework to evaluate NGS read mappersMethods for genome-wide DNA methylation analysis in human cancer.Summary of talks and papers at ISCB-Asia/SCCG 2012.Epigenetic control of gene regulation during development and disease: A view from the retina.EAGLE: Explicit Alternative Genome Likelihood Evaluator.
P2860
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P2860
A mostly traditional approach improves alignment of bisulfite-converted DNA.
description
2012 nî lūn-bûn
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2012年の論文
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2012年論文
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2012年論文
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2012年論文
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2012年論文
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2012年論文
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2012年论文
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2012年论文
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name
A mostly traditional approach improves alignment of bisulfite-converted DNA.
@ast
A mostly traditional approach improves alignment of bisulfite-converted DNA.
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type
label
A mostly traditional approach improves alignment of bisulfite-converted DNA.
@ast
A mostly traditional approach improves alignment of bisulfite-converted DNA.
@en
prefLabel
A mostly traditional approach improves alignment of bisulfite-converted DNA.
@ast
A mostly traditional approach improves alignment of bisulfite-converted DNA.
@en
P2093
P2860
P356
P1476
A mostly traditional approach improves alignment of bisulfite-converted DNA.
@en
P2093
Kiyoshi Asai
Martin C Frith
Ryota Mori
P2860
P356
10.1093/NAR/GKS275
P407
P577
2012-03-28T00:00:00Z