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Differential dependency network analysis to identify condition-specific topological changes in biological networks

Differential dependency network analysis to identify condition-specific topological changes in biological networks

http://www.wikidata.org/entity/Q37097107

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Pathway mapping and development of disease-specific biomarkers: protein-based network biomarkers Structure and dynamics of molecular networks: a novel paradigm of drug discovery: a comprehensive review Differential Regulatory Analysis Based on Coexpression Network in Cancer Research Biological Networks for Cancer Candidate Biomarkers Discovery Beyond differential expression: the quest for causal mutations and effector molecules Algorithms for network-based identification of differential regulators from transcriptome data: a systematic evaluation INDEED: Integrated differential expression and differential network analysis of omic data for biomarker discovery.DDN: a caBIG® analytical tool for differential network analysis A transcriptome analysis of two grapevine populations segregating for tendril phyllotaxy.Link-based quantitative methods to identify differentially coexpressed genes and gene pairs.Knowledge-fused differential dependency network models for detecting significant rewiring in biological networks Dynamic modelling of oestrogen signalling and cell fate in breast cancer cells Preclinical magnetic resonance imaging and systems biology in cancer research: current applications and challenges.An inferential framework for biological network hypothesis tests Gene differential coexpression analysis based on biweight correlation and maximum clique.KDDN: an open-source Cytoscape app for constructing differential dependency networks with significant rewiring New network topology approaches reveal differential correlation patterns in breast cancer.Molecular network analysis enhances understanding of the biology of mental disorders.Comparative network analysis via differential graphlet communities.EDDY: a novel statistical gene set test method to detect differential genetic dependencies.Network biology in medicine and beyond.Integration of Network Biology and Imaging to Study Cancer Phenotypes and Responses.Unravelling personalized dysfunctional gene network of complex diseases based on differential network model Endoplasmic reticulum stress, the unfolded protein response, autophagy, and the integrated regulation of breast cancer cell fate.Diffany: an ontology-driven framework to infer, visualise and analyse differential molecular networks.A powerful score-based statistical test for group difference in weighted biological networks Sparse regressions for predicting and interpreting subcellular localization of multi-label proteins Identifying Network Perturbation in Cancer.Differential network analysis reveals dysfunctional regulatory networks in gastric carcinogenesis.Incorporating prior biological knowledge for network-based differential gene expression analysis using differentially weighted graphical LASSO.Endocrine resistance in breast cancer--An overview and update.JDINAC: joint density-based non-parametric differential interaction network analysis and classification using high-dimensional sparse omics data.KNOWLEDGE-ASSISTED APPROACH TO IDENTIFY PATHWAYS WITH DIFFERENTIAL DEPENDENCIES.DINGO: differential network analysis in genomics Endoplasmic reticulum stress, the unfolded protein response, and gene network modeling in antiestrogen resistant breast cancer A powerful weighted statistic for detecting group differences of directed biological networks.DIFFERENTIAL PATHWAY DEPENDENCY DISCOVERY ASSOCIATED WITH DRUG RESPONSE ACROSS CANCER CELL LINES.Nuclear morphometry, nucleomics and prostate cancer progression Edge biomarkers for classification and prediction of phenotypes.A data-driven modeling approach to identify disease-specific multi-organ networks driving physiological dysregulation

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Differential dependency network analysis to identify condition-specific topological changes in biological networks

http://www.wikidata.org/entity/Q37097107

description

article científic

@ca

article scientifique

@fr

articolo scientifico

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artigo científico

@pt

bilimsel makale

@tr

scientific article published on 26 December 2008

@en

vedecký článok

@sk

vetenskaplig artikel

@sv

videnskabelig artikel

@da

vědecký článek

@cs

name

Differential dependency networ ...... changes in biological networks

@en

Differential dependency networ ...... hanges in biological networks.

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type

label

Differential dependency networ ...... changes in biological networks

@en

Differential dependency networ ...... hanges in biological networks.

@nl

prefLabel

Differential dependency networ ...... changes in biological networks

@en

Differential dependency networ ...... hanges in biological networks.

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Differential dependency networ ...... changes in biological networks

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Bai Zhang

http://www.w3.org/2001/XMLSchema#string

Eric P Hoffman

http://www.w3.org/2001/XMLSchema#string

Huai Li

http://www.w3.org/2001/XMLSchema#string

Jianhua Xuan

http://www.w3.org/2001/XMLSchema#string

Ming Zhan

http://www.w3.org/2001/XMLSchema#string

Rebecca B Riggins

http://www.w3.org/2001/XMLSchema#string

Robert Clarke

http://www.w3.org/2001/XMLSchema#string

Yue Wang

http://www.w3.org/2001/XMLSchema#string

Zhen Zhang

http://www.w3.org/2001/XMLSchema#string

P2860

Discovery of estrogen receptor alpha target genes and response elements in breast tumor cells

IAP suppression of apoptosis involves distinct mechanisms: the TAK1/JNK1 signaling cascade and caspase inhibition.

NF- kappa B2/p100 induces Bcl-2 expression

Ligand-independent activation of estrogen receptor alpha by XBP-1

SynTReN: a generator of synthetic gene expression data for design and analysis of structure learning algorithms.

Network biology: understanding the cell's functional organization

Estrogen withdrawal-induced NF-kappaB activity and bcl-3 expression in breast cancer cells: roles in growth and hormone independence

Mechanisms controlling embryonic stem cell self-renewal and differentiation

Systems biology: a brief overview

Using Bayesian networks to analyze expression data

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526-532

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scholarly article

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10.1093/BIOINFORMATICS/BTN660

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4

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25

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2008-12-26T00:00:00Z

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23708755

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19112081

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2642641

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