Fine-grained annotation and classification of de novo predicted LTR retrotransposons.
about
An expressed, endogenous Nodavirus-like element captured by a retrotransposon in the genome of the plant parasitic nematode Bursaphelenchus xylophilusCross-Species Transmission and Differential Fate of an Endogenous Retrovirus in Three Mammal LineagesGenome-wide characterization of endogenous retroviruses in the bat Myotis lucifugus reveals recent and diverse infectionsComparative genomic paleontology across plant kingdom reveals the dynamics of TE-driven genome evolutionDrosophila errantivirusesGenome and transcriptome analysis of the Mesoamerican common bean and the role of gene duplications in establishing tissue and temporal specialization of genesLong Terminal Repeat Retrotransposon Content in Eight Diploid Sunflower Species Inferred from Next-Generation Sequence Data.Draft genome sequence of adzuki bean, Vigna angularis.A simple and efficient method to isolate LTR sequences of plant retrotransposonDraft genome of spinach and transcriptome diversity of 120 Spinacia accessionsHybridization and polyploidy enable genomic plasticity without sex in the most devastating plant-parasitic nematodes.Convergent evolution of ribonuclease h in LTR retrotransposons and retroviruses.LTRsift: a graphical user interface for semi-automatic classification and postprocessing of de novo detected LTR retrotransposons.Genome sequence of mungbean and insights into evolution within Vigna speciesTransposon fingerprinting using low coverage whole genome shotgun sequencing in cacao (Theobroma cacao L.) and related species.Insights into the loblolly pine genome: characterization of BAC and fosmid sequences.Sex-specific aspects of endogenous retroviral insertion and deletionEvolutionary history of bovine endogenous retroviruses in the Bovidae family.Development of a Rhizoctonia solani AG1-IB Specific Gene Model Enables Comparative Genome Analyses between Phytopathogenic R. solani AG1-IA, AG1-IB, AG3 and AG8 Isolates.Combating a Global Threat to a Clonal Crop: Banana Black Sigatoka Pathogen Pseudocercospora fijiensis (Synonym Mycosphaerella fijiensis) Genomes Reveal Clues for Disease Control.An improved genome assembly uncovers prolific tandem repeats in Atlantic codGenome-wide analysis of transposable elements in the coffee berry borer Hypothenemus hampei (Coleoptera: Curculionidae): description of novel families.The sunflower genome provides insights into oil metabolism, flowering and Asterid evolution.Landscape and evolutionary dynamics of terminal repeat retrotransposons in miniature in plant genomes.The genome sequence of the outbreeding globe artichoke constructed de novo incorporating a phase-aware low-pass sequencing strategy of F1 progenyChicken (Gallus gallus) endogenous retrovirus generates genomic variations in the chicken genomeSMYD5 regulates H4K20me3-marked heterochromatin to safeguard ES cell self-renewal and prevent spurious differentiation.Resolving fine-grained dynamics of retrotransposons: comparative analysis of inferential methods and genomic resources.Transposome: a toolkit for annotation of transposable element families from unassembled sequence reads.LTRclassifier: A website for fast structural LTR retrotransposons classification in plants.LTRtype, an Efficient Tool to Characterize Structurally Complex LTR Retrotransposons and Nested Insertions on Genomes.Discovery of a novel long terminal repeat (LTR2i_SS) in Sus Scrofa.MAKER-P: a tool kit for the rapid creation, management, and quality control of plant genome annotations.De novo assembly of the zucchini genome reveals a whole-genome duplication associated with the origin of the Cucurbita genus.Epigenetic regulation of subgenome dominance following whole genome triplication in Brassica rapa.Improved maize reference genome with single-molecule technologies.New reference genome sequences of hot pepper reveal the massive evolution of plant disease-resistance genes by retroduplication.Draft Sequencing of the Heterozygous Diploid Genome of Satsuma (Citrus unshiu Marc.) Using a Hybrid Assembly Approach.Convergent adaptive evolution in marginal environments: unloading transposable elements as a common strategy among mangrove genomes.Evolutionary Epigenomics of Retrotransposon-Mediated Methylation Spreading in Rice.
P2860
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P2860
Fine-grained annotation and classification of de novo predicted LTR retrotransposons.
description
2009 nî lūn-bûn
@nan
2009年の論文
@ja
2009年論文
@yue
2009年論文
@zh-hant
2009年論文
@zh-hk
2009年論文
@zh-mo
2009年論文
@zh-tw
2009年论文
@wuu
2009年论文
@zh
2009年论文
@zh-cn
name
Fine-grained annotation and classification of de novo predicted LTR retrotransposons.
@en
Fine-grained annotation and classification of de novo predicted LTR retrotransposons.
@nl
type
label
Fine-grained annotation and classification of de novo predicted LTR retrotransposons.
@en
Fine-grained annotation and classification of de novo predicted LTR retrotransposons.
@nl
prefLabel
Fine-grained annotation and classification of de novo predicted LTR retrotransposons.
@en
Fine-grained annotation and classification of de novo predicted LTR retrotransposons.
@nl
P2860
P356
P1476
Fine-grained annotation and classification of de novo predicted LTR retrotransposons
@en
P2093
Gordon Gremme
Stefan Kurtz
P2860
P304
P356
10.1093/NAR/GKP759
P407
P577
2009-11-01T00:00:00Z