Influence of DNA structure on DNA polymerase beta active site function: extension of mutagenic DNA intermediates. - Wikidata - wikimedia - TriplyDB

Influence of DNA structure on DNA polymerase beta active site function: extension of mutagenic DNA intermediates.

Influence of DNA structure on DNA polymerase beta active site function: extension of mutagenic DNA intermediates.

http://www.wikidata.org/entity/Q53639781

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Coordination of steps in single-nucleotide base excision repair mediated by apurinic/apyrimidinic endonuclease 1 and DNA polymerase beta Human base excision repair enzymes apurinic/apyrimidinic endonuclease1 (APE1), DNA polymerase beta and poly(ADP-ribose) polymerase 1: interplay between strand-displacement DNA synthesis and proofreading exonuclease activity Structures of DNA Polymerase β with Active-Site Mismatches Suggest a Transient Abasic Site Intermediate during Misincorporation α,β-Difluoromethylene Deoxynucleoside 5′-Triphosphates: A Convenient Synthesis of Useful Probes for DNA Polymerase β Structure and Function DNA Polymerase Substrate Specificity: SIDE CHAIN MODULATION OF THE"A-RULE"Molecular Insights into DNA Polymerase Deterrents for Ribonucleotide Insertion Structures of dNTP Intermediate States during DNA Polymerase Active Site Assembly DNA polymerase minor groove interactions modulate mutagenic bypass of a templating 8-oxoguanine lesion Transition-state destabilization reveals how human DNA polymerase β proceeds across the chemically unstable lesion N7-methylguanine Structures of DNA Polymerase Mispaired DNA Termini Transitioning to Pre-catalytic Complexes Support an Induced-Fit Fidelity Mechanism Structure and mechanism of DNA polymerase β Regulation of DNA repair fidelity by molecular checkpoints: "gates" in DNA polymerase beta's substrate selection The fidelity of DNA synthesis by yeast DNA polymerase zeta alone and with accessory proteins.DNA polymerase β uses its lyase domain in a processive search for DNA damage.Base excision repair of tandem modifications in a methylated CpG dinucleotide.Capturing a mammalian DNA polymerase extending from an oxidized nucleotide.Differentiation of Salmonella strains from the SARA, SARB and SARC reference collections by using three genes PCR-RFLP and the 2100 Agilent Bioanalyzer.DNA polymerase beta ribonucleotide discrimination: insertion, misinsertion, extension, and coding.Modeling DNA polymerase μ motions: subtle transitions before chemistry.In silico studies of the African swine fever virus DNA polymerase X support an induced-fit mechanism Substrate-induced DNA polymerase β activation.Homologous recombination prevents methylation-induced toxicity in Escherichia coli.Uncovering the polymerase-induced cytotoxicity of an oxidized nucleotide Sequential side-chain residue motions transform the binary into the ternary state of DNA polymerase lambda.Structure of DNA polymerase beta with a benzo[c]phenanthrene diol epoxide-adducted template exhibits mutagenic features DNA pol λ's extraordinary ability to stabilize misaligned DNA.Magnesium-induced assembly of a complete DNA polymerase catalytic complex.Promiscuous mismatch extension by human DNA polymerase lambda Base excision repair and design of small molecule inhibitors of human DNA polymerase β.The L561A substitution in the nascent base-pair binding pocket of RB69 DNA polymerase reduces base discrimination.The X family portrait: structural insights into biological functions of X family polymerases.DNA sequence context effects on the glycosylase activity of human 8-oxoguanine DNA glycosylase.Insertion of oxidized nucleotide triggers rapid DNA polymerase opening Substrate rescue of DNA polymerase β containing a catastrophic L22P mutation.Impact of alternative DNA structures on DNA damage, DNA repair, and genetic instability Dipole-dipole interaction stabilizes the transition state of apurinic/apyrimidinic endonuclease--abasic site interaction.Mismatched base-pair simulations for ASFV Pol X/DNA complexes help interpret frequent G*G misincorporation.DNA Polymerase Fidelity: Beyond Right and Wrong.Unencumbered Pol β lyase activity in nucleosome core particles.A specific N-terminal extension of the 8 kDa domain is required for DNA end-bridging by human Polμ and Polλ.

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Influence of DNA structure on DNA polymerase beta active site function: extension of mutagenic DNA intermediates.

http://www.wikidata.org/entity/Q53639781

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Influence of DNA structure on ...... f mutagenic DNA intermediates.

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Influence of DNA structure on ...... f mutagenic DNA intermediates.

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David D Shock

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William A Beard

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P2860

Human DINB1-encoded DNA polymerase kappa is a promiscuous extender of mispaired primer termini

A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding

Structures of ternary complexes of rat DNA polymerase beta, a DNA template-primer, and ddCTP

Structure of Taq polymerase with DNA at the polymerase active site

Crystal structures of human DNA polymerase beta complexed with gapped and nicked DNA: evidence for an induced fit mechanism

Crystal structure of a bacteriophage T7 DNA replication complex at 2.2 A resolution

Visualizing DNA replication in a catalytically active Bacillus DNA polymerase crystal

Structures of mismatch replication errors observed in a DNA polymerase

DNA replication fidelity

Crystal structures of open and closed forms of binary and ternary complexes of the large fragment of Thermus aquaticus DNA polymerase I: structural basis for nucleotide incorporation.

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31921-31929

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10.1074/JBC.M404016200

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Samuel H. Wilson

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2004-05-15T00:00:00Z

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15145936

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