Quantitative deep sequencing reveals dynamic HIV-1 escape and large population shifts during CCR5 antagonist therapy in vivo.
about
Interventions for prevention and treatment of vulvovaginal candidiasis in women with HIV infectionExposing malaria in-host diversity and estimating population diversity by capture-recapture using massively parallel pyrosequencing.Viral quasispecies evolutionNew virologic tools for management of chronic hepatitis B and CDynamics of HIV-1 quasispecies during antiviral treatment dissected using ultra-deep pyrosequencingTwo HIV-1 variants resistant to small molecule CCR5 inhibitors differ in how they use CCR5 for entryThe evolutionary analysis of emerging low frequency HIV-1 CXCR4 using variants through time--an ultra-deep approachMutation of HIV-1 genomes in a clinical population treated with the mutagenic nucleoside KP1461Genetic heterogeneity of hepatitis C virus in association with antiviral therapy determined by ultra-deep sequencingEvaluation of persistence of resistant variants with ultra-deep pyrosequencing in chronic hepatitis C patients treated with telaprevirUltra-deep pyrosequencing detects conserved genomic sites and quantifies linkage of drug-resistant amino acid changes in the hepatitis B virus genomePrevalence of WHO transmitted drug resistance mutations by deep sequencing in antiretroviral-naïve subjects in Hunan Province, ChinaA Cinnamon-Derived Procyanidin Compound Displays Anti-HIV-1 Activity by Blocking Heparan Sulfate- and Co-Receptor- Binding Sites on gp120 and Reverses T Cell Exhaustion via Impeding Tim-3 and PD-1 UpregulationSHIV-162P3 infection of rhesus macaques given maraviroc gel vaginally does not involve resistant virusesDevelopment of a low bias method for characterizing viral populations using next generation sequencing technologyReconstructing the Dynamics of HIV Evolution within Hosts from Serial Deep Sequence DataHybridization capture reveals evolution and conservation across the entire Koala retrovirus genomeSequential bottlenecks drive viral evolution in early acute hepatitis C virus infection.Complete viral RNA genome sequencing of ultra-low copy samples by sequence-independent amplificationWhole genome deep sequencing of HIV-1 reveals the impact of early minor variants upon immune recognition during acute infection.Beyond the consensus: dissecting within-host viral population diversity of foot-and-mouth disease virus by using next-generation genome sequencing.Nautilus: a bioinformatics package for the analysis of HIV type 1 targeted deep sequencing data.PCR-induced transitions are the major source of error in cleaned ultra-deep pyrosequencing dataIndel and Carryforward Correction (ICC): a new analysis approach for processing 454 pyrosequencing dataPosition-specific automated processing of V3 env ultra-deep pyrosequencing data for predicting HIV-1 tropismEstimation of genetic diversity in viral populations from next generation sequencing data with extremely deep coveragePhylogenetic analysis of population-based and deep sequencing data to identify coevolving sites in the nef gene of HIV-1.Infidelity of SARS-CoV Nsp14-exonuclease mutant virus replication is revealed by complete genome sequencing.Emergence of CXCR4-tropic HIV-1 variants followed by rapid disease progression in hemophiliac slow progressors.Error correction of next-generation sequencing data and reliable estimation of HIV quasispecies.Transmission of single HIV-1 genomes and dynamics of early immune escape revealed by ultra-deep sequencing.Estimating time since infection in early homogeneous HIV-1 samples using a poisson model.Within-host whole-genome deep sequencing and diversity analysis of human respiratory syncytial virus infection reveals dynamics of genomic diversity in the absence and presence of immune pressureStructure of HIV-1 quasi-species as early indicator for switches of co-receptor tropism.Accurate viral population assembly from ultra-deep sequencing data.Anti-HIV-1 activity of weekly or biweekly treatment with subcutaneous PRO 140, a CCR5 monoclonal antibody.Genotypic tropism testing by massively parallel sequencing: qualitative and quantitative analysis.Detection of inferred CCR5- and CXCR4-using HIV-1 variants and evolutionary intermediates using ultra-deep pyrosequencing.Resistance to the CCR5 inhibitor 5P12-RANTES requires a difficult evolution from CCR5 to CXCR4 coreceptor use.Performance of ultra-deep pyrosequencing in analysis of HIV-1 pol gene variation.
P2860
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P2860
Quantitative deep sequencing reveals dynamic HIV-1 escape and large population shifts during CCR5 antagonist therapy in vivo.
description
2009 nî lūn-bûn
@nan
2009 թուականի Մայիսին հրատարակուած գիտական յօդուած
@hyw
2009 թվականի մայիսին հրատարակված գիտական հոդված
@hy
2009年の論文
@ja
2009年論文
@yue
2009年論文
@zh-hant
2009年論文
@zh-hk
2009年論文
@zh-mo
2009年論文
@zh-tw
2009年论文
@wuu
name
Quantitative deep sequencing r ...... R5 antagonist therapy in vivo.
@ast
Quantitative deep sequencing r ...... R5 antagonist therapy in vivo.
@en
type
label
Quantitative deep sequencing r ...... R5 antagonist therapy in vivo.
@ast
Quantitative deep sequencing r ...... R5 antagonist therapy in vivo.
@en
prefLabel
Quantitative deep sequencing r ...... R5 antagonist therapy in vivo.
@ast
Quantitative deep sequencing r ...... R5 antagonist therapy in vivo.
@en
P2093
P2860
P50
P1433
P1476
Quantitative deep sequencing r ...... R5 antagonist therapy in vivo.
@en
P2093
Athe M N Tsibris
Brian Gaschen
Carsten Russ
Charles Flexner
Chien-Chi Lo
Daniel R Kuritzkes
Eoin Coakley
James Theiler
Michael D Hughes
Ramy Arnaout
P2860
P356
10.1371/JOURNAL.PONE.0005683
P407
P577
2009-05-25T00:00:00Z