Mutational Analysis of the Purine Riboswitch Aptamer Domain † - Wikidata - awgldk - TriplyDB

Mutational Analysis of the Purine Riboswitch Aptamer Domain †

Mutational Analysis of the Purine Riboswitch Aptamer Domain †

http://www.wikidata.org/entity/Q27648892

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The structure of a tetrahydrofolate-sensing riboswitch reveals two ligand binding sites in a single aptamer A Structural Basis for the Recognition of 2′-Deoxyguanosine by the Purine Riboswitch Adaptive Ligand Binding by the Purine Riboswitch in the Recognition of Guanine and Adenine Analogs Riboswitch structure: an internal residue mimicking the purine ligand Structural principles of nucleoside selectivity in a 2′-deoxyguanosine riboswitch Nucleotides Adjacent to the Ligand-Binding Pocket are Linked to Activity Tuning in the Purine Riboswitch Riboswitches: structures and mechanisms Structure and dynamics of the deoxyguanosine-sensing riboswitch studied by NMR-spectroscopy RNALogo: a new approach to display structural RNA alignment.Idiosyncratically tuned switching behavior of riboswitch aptamer domains revealed by comparative small-angle X-ray scattering analysis.Semiautomated model building for RNA crystallography using a directed rotameric approach.Design and antimicrobial action of purine analogues that bind Guanine riboswitches.Multivector fluorescence analysis of the xpt guanine riboswitch aptamer domain and the conformational role of guanine The purine riboswitch as a model system for exploring RNA biology and chemistry Riboswitches as hormone receptors: hypothetical cytokinin-binding riboswitches in Arabidopsis thaliana High-throughput mutate-map-rescue evaluates SHAPE-directed RNA structure and uncovers excited states.Computational identification of riboswitches based on RNA conserved functional sequences and conformations Comparative sequence and structure analysis reveals the conservation and diversity of nucleotide positions and their associated tertiary interactions in the riboswitches.Structure-guided mutational analysis of gene regulation by the Bacillus subtilis pbuE adenine-responsive riboswitch in a cellular context.Constitutive regulatory activity of an evolutionarily excluded riboswitch variant.Ligand-mediated and tertiary interactions cooperatively stabilize the P1 region in the guanine-sensing riboswitch.Denaturation of RNA secondary and tertiary structure by urea: simple unfolded state models and free energy parameters account for measured m-values.Effects of Mg2+ on the free energy landscape for folding a purine riboswitch RNA.Information-theoretic uncertainty of SCFG-modeled folding space of the non-coding RNA.Modularity of select riboswitch expression platforms enables facile engineering of novel genetic regulatory devices.Structure and mechanism of purine-binding riboswitches.The long and the short of riboswitches.A switch in time: detailing the life of a riboswitch Three-way RNA junctions with remote tertiary contacts: a recurrent and highly versatile fold.Strategies for the design of RNA-binding small molecules.A new way to see RNA.ITC analysis of ligand binding to preQ₁ riboswitches.Ligand-dependent folding of the three-way junction in the purine riboswitch.Role of lysine binding residues in the global folding of the lysC riboswitch.Mechanisms for differentiation between cognate and near-cognate ligands by purine riboswitches.Role of ligand binding in structural organization of add A-riboswitch aptamer: a molecular dynamics simulation.Molecular insights into the ligand-controlled organization of the SAM-I riboswitch.MD simulations of ligand-bound and ligand-free aptamer: molecular level insights into the binding and switching mechanism of the add A-riboswitch Classification of pseudo pairs between nucleotide bases and amino acids by analysis of nucleotide-protein complexes.Bioinformatic analysis of riboswitch structures uncovers variant classes with altered ligand specificity.

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P2860

Mutational Analysis of the Purine Riboswitch Aptamer Domain †

http://www.wikidata.org/entity/Q27648892

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2007 nî lūn-bûn

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2007 թուականի Նոյեմբերին հրատարակուած գիտական յօդուած

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2007年の論文

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Mutational Analysis of the Purine Riboswitch Aptamer Domain †

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Mutational Analysis of the Purine Riboswitch Aptamer Domain †

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Mutational Analysis of the Purine Riboswitch Aptamer Domain †

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Mutational Analysis of the Purine Riboswitch Aptamer Domain †

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Mutational Analysis of the Purine Riboswitch Aptamer Domain †

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Mutational Analysis of the Purine Riboswitch Aptamer Domain †

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Mutational Analysis of the Purine Riboswitch Aptamer Domain †

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Mutational Analysis of the Purine Riboswitch Aptamer Domain †

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Mutational Analysis of the Purine Riboswitch Aptamer Domain †

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Mutational Analysis of the Purine Riboswitch Aptamer Domain †

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Andrea L Edwards

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Crystal E Love

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Robert T Batey

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Sunny D Gilbert

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P2860

An mRNA structure that controls gene expression by binding FMN

A conserved RNA structure (thi box) is involved in regulation of thiamin biosynthetic gene expression in bacteria

Rfam: annotating non-coding RNAs in complete genomes

Regulation of lysine biosynthesis and transport genes in bacteria: yet another RNA riboswitch?

An mRNA structure in bacteria that controls gene expression by binding lysine

THESEUS: maximum likelihood superpositioning and analysis of macromolecular structures

Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

The finer things in X-ray diffraction data collection

The S box regulon: a new global transcription termination control system for methionine and cysteine biosynthesis genes in gram-positive bacteria

An mRNA structure that controls gene expression by binding S-adenosylmethionine

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13297-309

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1832846

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10.1021/BI700410G

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46

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17960911

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