Does water play a structural role in the folding of small nucleic acids?
about
High-resolution reversible folding of hyperstable RNA tetraloops using molecular dynamics simulationsSodium perchlorate effects on the helical stability of a mainly alanine peptide.Computational exploration of mobile ion distributions around RNA duplexConformational dynamics of RNA-peptide binding: a molecular dynamics simulation study.Loop dependence of the stability and dynamics of nucleic acid hairpins.Rapid equilibrium sampling initiated from nonequilibrium dataEnsemble simulations: folding, unfolding and misfolding of a high-efficiency frameshifting RNA pseudoknotEquilibrium conformational dynamics in an RNA tetraloop from massively parallel molecular dynamics.Building Markov state models with solvent dynamics.Trapped water molecules are essential to structural dynamics and function of a ribozyme.High performance computing in biology: multimillion atom simulations of nanoscale systemsMolecular dynamics simulations of RNA: an in silico single molecule approach.Folding of a DNA hairpin loop structure in explicit solvent using replica-exchange molecular dynamics simulations.Probing the structural hierarchy and energy landscape of an RNA T-loop hairpinRefinement of Generalized Born Implicit Solvation Parameters for Nucleic Acids and Their Complexes with Proteins.Ribozyme catalysis revisited: is water involved?Parameterization of aromatic azido groups: application as photoaffinity probes in molecular dynamics studies.Elbow flexibility of the kt38 RNA kink-turn motif investigated by free-energy molecular dynamics simulations.Binding ensemble profiling with photoaffinity labeling (BEProFL) approach: mapping the binding poses of HDAC8 inhibitorsBinding of the bacteriophage P22 N-peptide to the boxB RNA motif studied by molecular dynamics simulations.Advances in RNA molecular dynamics: a simulator's guide to RNA force fields.Water isotope effect on the thermostability of a polio viral RNA hairpin: A metadynamics study.Constructing multi-resolution Markov State Models (MSMs) to elucidate RNA hairpin folding mechanismsFree energy profile of RNA hairpins: a molecular dynamics simulation study.Structural insight into RNA hairpin folding intermediatesElectrostatic free energy landscapes for nucleic acid helix assemblyExtensive backbone dynamics in the GCAA RNA tetraloop analyzed using 13C NMR spin relaxation and specific isotope labeling.Thermodynamics and kinetics of the hairpin ribozyme from atomistic folding/unfolding simulations.Nanoscale dewetting transition in protein complex foldingWater-dependent optical activity inversion of chiral DNA-silica assemblies.RNA Structural Dynamics As Captured by Molecular Simulations: A Comprehensive Overview.Molecular simulation of multistate peptide dynamics: a comparison between microsecond timescale sampling and multiple shorter trajectories.
P2860
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P2860
Does water play a structural role in the folding of small nucleic acids?
description
2005 nî lūn-bûn
@nan
2005 թուականի Յունուարին հրատարակուած գիտական յօդուած
@hyw
2005 թվականի հունվարին հրատարակված գիտական հոդված
@hy
2005年の論文
@ja
2005年論文
@yue
2005年論文
@zh-hant
2005年論文
@zh-hk
2005年論文
@zh-mo
2005年論文
@zh-tw
2005年论文
@wuu
name
Does water play a structural role in the folding of small nucleic acids?
@ast
Does water play a structural role in the folding of small nucleic acids?
@en
Does water play a structural role in the folding of small nucleic acids?
@nl
type
label
Does water play a structural role in the folding of small nucleic acids?
@ast
Does water play a structural role in the folding of small nucleic acids?
@en
Does water play a structural role in the folding of small nucleic acids?
@nl
prefLabel
Does water play a structural role in the folding of small nucleic acids?
@ast
Does water play a structural role in the folding of small nucleic acids?
@en
Does water play a structural role in the folding of small nucleic acids?
@nl
P2860
P1433
P1476
Does water play a structural role in the folding of small nucleic acids?
@en
P2093
Eric J Sorin
Vijay S Pande
P2860
P304
P356
10.1529/BIOPHYSJ.104.055087
P407
P577
2005-01-28T00:00:00Z