Leveraging enzyme structure-function relationships for functional inference and experimental design: the structure-function linkage database. - Wikidata - awgldk - TriplyDB

Leveraging enzyme structure-function relationships for functional inference and experimental design: the structure-function linkage database.

Leveraging enzyme structure-function relationships for functional inference and experimental design: the structure-function linkage database.

http://www.wikidata.org/entity/Q34496170

about

Annotation error in public databases: misannotation of molecular function in enzyme superfamilies A gold standard set of mechanistically diverse enzyme superfamilies.ModBase, a database of annotated comparative protein structure models, and associated resources The Enzyme Function Initiative.Structure-based activity prediction for an enzyme of unknown function Discovery of a dipeptide epimerase enzymatic function guided by homology modeling and virtual screening Functional Annotation and Three-Dimensional Structure of Dr0930 from Deinococcus radiodurans , a Close Relative of Phosphotriesterase in the Amidohydrolase Superfamily † ‡Functional Annotation of Two New Carboxypeptidases from the Amidohydrolase Superfamily of Enzymes Annotating Enzymes of Uncertain Function: The Deacylation of d -Amino Acids by Members of the Amidohydrolase Superfamily ,Functional Identification and Structure Determination of Two Novel Prolidases from cog1228 in the Amidohydrolase Superfamily,Directed Evolution of a Thermostable Quorum-quenching Lactonase from the Amidohydrolase Superfamily Prediction of function for the polyprenyl transferase subgroup in the isoprenoid synthase superfamily Computational redesign of a mononuclear zinc metalloenzyme for organophosphate hydrolysis Structure-guided discovery of the metabolite carboxy-SAM that modulates tRNA function X-ray analysis of butirosin biosynthetic enzyme BtrN redefines structural motifs for AdoMet radical chemistry Radical SAM enzyme QueE defines a new minimal core fold and metal-dependent mechanism Protein function prediction: towards integration of similarity metrics.MACiE: exploring the diversity of biochemical reactions Evolution of function in the "two dinucleotide binding domains" flavoproteins Evolutionarily conserved substrate substructures for automated annotation of enzyme superfamilies Quantitative comparison of catalytic mechanisms and overall reactions in convergently evolved enzymes: implications for classification of enzyme function Pa0148 from Pseudomonas aeruginosa catalyzes the deamination of adenine MACiE (Mechanism, Annotation and Classification in Enzymes): novel tools for searching catalytic mechanisms PINGU: PredIction of eNzyme catalytic residues usinG seqUence information Molecular Diversity of Terpene Synthases in the Liverwort Marchantia polymorpha ModBase, a database of annotated comparative protein structure models and associated resources.Exploring the structure and function paradigm.Using sequence similarity networks for visualization of relationships across diverse protein superfamilies.PSI-2: structural genomics to cover protein domain family space.Analysis of substructural variation in families of enzymatic proteins with applications to protein function prediction.Evolution of efficient pathways for degradation of anthropogenic chemicals.Parallel clustering algorithm for large-scale biological data sets Uronate isomerase: a nonhydrolytic member of the amidohydrolase superfamily with an ambivalent requirement for a divalent metal ion.Automated protein subfamily identification and classification.ComPath: comparative enzyme analysis and annotation in pathway/subsystem contexts GeMMA: functional subfamily classification within superfamilies of predicted protein structural domains.Clustering of protein families into functional subtypes using Relative Complexity Measure with reduced amino acid alphabets.Toward accurate screening in computer-aided enzyme design.The LabelHash algorithm for substructure matching.Improving the quality of protein similarity network clustering algorithms using the network edge weight distribution.

P2860

Q21145347-63490713-5358-4877-ABA4-5988EE812AAD Q21184154-3A484612-1153-4767-8FAC-216AA3582975 Q24613729-ED51B61F-B4C4-4234-8903-9AC72C2A279C Q24628703-4A9FB2E7-5528-49EF-90DF-4EEE35B60AB9 Q24642801-E1FB2B13-3FFA-41F5-9D33-60483EBB4CA0 Q24646625-26FB7AEF-3E8B-400A-AC08-9D1819EC6103 Q27653489-22E9D6B8-34C3-4B20-BEC2-8224881C4C39 Q27654600-1C7A2047-F794-4710-BD48-62C7F2FC670C Q27655879-A3E5F279-C110-4BBC-8FA3-000DEECF8EFA Q27663153-AAF120A8-2A1E-4195-A11B-3ACE779DE71A Q27665391-90B533BB-D3EB-40B6-BC6C-82515AEF20B5 Q27676831-A66802E9-D67B-4DB5-9FBB-0E886986556A Q27677060-7629F3E1-72EF-4315-AAEE-CA3D7C79B1F1 Q27678153-56664BDD-4077-4AEE-99CB-33F5C817822A Q27679985-C54AEBE5-B347-431D-A649-C26A3263D8C1 Q27681041-B1C863EE-1280-4F1B-AB7A-5986CFB16B70 Q27687386-EAC7F82E-5DE8-4DDA-827C-F42BFD4D37CB Q28038506-BA958E2F-AB63-4CD2-ABE8-9A5A08E9BF8F Q28469259-6479EACF-4C6B-4F35-A55C-05AE2F45EF9E Q28473170-68852571-31A5-4AB1-A431-04B140C55305 Q28473198-661B996A-FE5D-46CC-8EEF-AE3D0D78A7A0 Q28493006-18F6A1C8-085B-461B-B7D8-223C38BF334D Q28539756-90FE83F6-2E39-4C93-AA81-7896EDD855BF Q28547146-321D9860-31E9-4176-AB6C-8FB4A0C08E39 Q28590275-15135BB9-7A1D-4E88-A7A4-ABB975783893 Q30355976-509335B6-76DB-4465-B966-E7B974003945 Q30369983-2C68ED31-9D95-41D8-9193-838A683503C3 Q30374720-E82AF040-E734-4F48-B485-BB0F649931E0 Q30378022-829EE075-D43F-4B3A-801B-32FAF0F291EA Q30389018-CE3BF6F2-BE4A-483A-AA34-A39624CDF573 Q30481546-ED5B3F02-C8B8-4458-A556-95D48251EF46 Q30794556-1898614C-3978-439F-855D-413F4EE638E2 Q31043969-8A8A0041-C4A1-4ECA-B838-E267D2F564E6 Q33294652-2BF9CAE2-F285-4D2D-A1CE-73D943C6050E Q33322945-566C3F0D-F397-4224-BD06-061C524A978F Q33633731-C13780D1-70B1-40A8-BB79-2ABB356CFF82 Q33662531-70AD8868-AC8A-49B2-B6BF-D65752016E0B Q33706085-D6706061-C70D-4B00-BC81-E95CEB4A4D71 Q33744489-105429C0-ACA5-4A7C-8CAC-4EE7F2BF00B3 Q33759251-EC405F54-F498-4404-A737-8DDB807705ED

P2860

Leveraging enzyme structure-function relationships for functional inference and experimental design: the structure-function linkage database.

http://www.wikidata.org/entity/Q34496170

description

2006 nî lūn-bûn

@nan

2006 թուականի Փետրուարին հրատարակուած գիտական յօդուած

@hyw

2006 թվականի փետրվարին հրատարակված գիտական հոդված

@hy

2006年の論文

@ja

2006年論文

@yue

2006年論文

@zh-hant

2006年論文

@zh-hk

2006年論文

@zh-mo

2006年論文

@zh-tw

2006年论文

@wuu

name

Leveraging enzyme structure-fu ...... ure-function linkage database.

@ast

Leveraging enzyme structure-fu ...... ure-function linkage database.

@en

Leveraging enzyme structure-fu ...... ure-function linkage database.

@nl

type

label

Leveraging enzyme structure-fu ...... ure-function linkage database.

@ast

Leveraging enzyme structure-fu ...... ure-function linkage database.

@en

Leveraging enzyme structure-fu ...... ure-function linkage database.

@nl

prefLabel

Leveraging enzyme structure-fu ...... ure-function linkage database.

@ast

Leveraging enzyme structure-fu ...... ure-function linkage database.

@en

Leveraging enzyme structure-fu ...... ure-function linkage database.

@nl

P1433

Q34496170-FC035B61-EDAC-460A-A503-C88F9A8356C4

P1476

Q34496170-CD7FCFF8-1977-49E3-94AE-F7C84E0BB102

P2093

Q34496170-10CE181F-B310-4993-8064-927E88A60BF3

Q34496170-15FC6E8D-29DF-41BB-AED9-44256AD395DA

Q34496170-3E838B83-708F-451E-B460-50846ABE5F33

Q34496170-42FD2531-8E92-4174-A24E-A0F583AE180D

Q34496170-5FFAC46A-0F99-48AE-9764-B3A7675DCC23

Q34496170-9B1D883A-A742-4B24-9448-4DDFBFEE48AF

Q34496170-A4A42F45-CC60-44BC-8201-AD51D6A63CBD

Q34496170-B0212309-688E-403E-8F91-613243DD7A48

Q34496170-D2BAB1AA-0006-420E-802F-04664507CBA7

P304

Q34496170-92B27139-5D15-47E9-8FFB-BBD095D5D0B3

P31

Q34496170-E8F9302D-4388-4904-9A7C-FE7761678E97

P356

Q34496170-0B20FFD9-9A52-4C90-83F1-3AA1F70A0BA9

P407

Q34496170-C9A13C6C-F811-4BD2-9B8A-CBB41F2AF6FE

P433

Q34496170-389FDB4A-3C56-40CB-8B18-8C7B083FD6F5

P478

Q34496170-B23471C5-457E-4F57-B9A7-91E0C57230E2

P50

Q34496170-5E747692-E4BB-48BC-9A73-DD52F72E86A6

P577

Q34496170-E7E8C5FE-A761-4470-9E7A-B828D584C42D

P5875

Q34496170-8FB1E018-48F0-4354-9848-0E0496EE6A78

P698

Q34496170-ED683EE1-0744-40F2-99EC-BE3DBCE9960F

P921

Q34496170-9E91D849-BCD0-4018-96BC-D7EA3DE58374

P356

P1433

P1476

Leveraging enzyme structure-fu ...... ure-function linkage database.

@en

P2093

Conrad C Huang

http://www.w3.org/2001/XMLSchema#string

Elaine C Meng

http://www.w3.org/2001/XMLSchema#string

Jennifer Seffernick

http://www.w3.org/2001/XMLSchema#string

John H Morris

http://www.w3.org/2001/XMLSchema#string

Patricia J Chang

http://www.w3.org/2001/XMLSchema#string

Scott C-H Pegg

http://www.w3.org/2001/XMLSchema#string

Shoshana D Brown

http://www.w3.org/2001/XMLSchema#string

Sunil Ojha

http://www.w3.org/2001/XMLSchema#string

Thomas E Ferrin

http://www.w3.org/2001/XMLSchema#string

P304

2545-2555

http://www.w3.org/2001/XMLSchema#string

P31

scholarly article

P356

10.1021/BI052101L

http://www.w3.org/2001/XMLSchema#string

P407

P433

8

http://www.w3.org/2001/XMLSchema#string

P478

45

http://www.w3.org/2001/XMLSchema#string

P50

Patricia Babbitt

P577

2006-02-01T00:00:00Z

http://www.w3.org/2001/XMLSchema#dateTime

P5875

7286979

http://www.w3.org/2001/XMLSchema#string

P698

16489747

http://www.w3.org/2001/XMLSchema#string

P921