Diversity and complexity in DNA recognition by transcription factors - Test2 - elhamkhani - TriplyDB

Diversity and complexity in DNA recognition by transcription factors

Diversity and complexity in DNA recognition by transcription factors

http://www.wikidata.org/entity/Q29619632

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A large fraction of extragenic RNA pol II transcription sites overlap enhancers Does positive selection drive transcription factor binding site turnover? A test with Drosophila cis-regulatory modules Five-vertebrate ChIP-seq reveals the evolutionary dynamics of transcription factor binding HEATR2 plays a conserved role in assembly of the ciliary motile apparatus Sequence-specific recognition of methylated DNA by human zinc-finger proteins UniPROBE, update 2011: expanded content and search tools in the online database of protein-binding microarray data on protein-DNA interactions MUSI: an integrated system for identifying multiple specificity from very large peptide or nucleic acid data sets Identification of transcriptional regulators in the mouse immune system Insights from genomic profiling of transcription factors High-resolution genome-wide in vivo footprinting of diverse transcription factors in human cells The MAPPER2 Database: a multi-genome catalog of putative transcription factor binding sites ScerTF: a comprehensive database of benchmarked position weight matrices for Saccharomyces species Genomic regions flanking E-box binding sites influence DNA binding specificity of bHLH transcription factors through DNA shape JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles Dry and wet approaches for genome-wide functional annotation of conventional and unconventional transcriptional activators Analysis of Genomic Sequence Motifs for Deciphering Transcription Factor Binding and Transcriptional Regulation in Eukaryotic Cells Specificity and nonspecificity in RNA-protein interactions Epigenetic mechanisms and developmental choice hierarchies in T-lymphocyte development Disentangling the many layers of eukaryotic transcriptional regulation Regulatory Principles Governing Tissue Specificity of Developmental Enhancers Using protein-binding microarrays to study transcription factor specificity: homologs, isoforms and complexes Bipartite recognition of DNA by TCF/Pangolin is remarkably flexible and contributes to transcriptional responsiveness and tissue specificity of wingless signaling ETS-4 is a transcriptional regulator of life span in Caenorhabditis elegans Structure of Smad1 MH1/DNA complex reveals distinctive rearrangements of BMP and TGF- effectors Structural basis for recognition of AT-rich DNA by unrelated xenogeneic silencing proteins The crystal structure of the Sox4 HMG domain-DNA complex suggests a mechanism for positional interdependence in DNA recognition A promiscuous intermediate underlies the evolution of LEAFY DNA binding specificity Progress and challenges for chemical probing of RNA structure inside living cells DNA-dependent formation of transcription factor pairs alters their binding specificity Crowdsourcing biomedical research: leveraging communities as innovation engines De novo identification and biophysical characterization of transcription-factor binding sites with microfluidic affinity analysis Massively parallel measurements of molecular interaction kinetics on a microfluidic platform.Distinguishing direct versus indirect transcription factor-DNA interactions.Mechanisms of mutational robustness in transcriptional regulation The multiple-specificity landscape of modular peptide recognition domains Genome-wide binding studies reveal DNA binding specificity mechanisms and functional interplay amongst Forkhead transcription factors An expansive human regulatory lexicon encoded in transcription factor footprints Discovery and characterization of human exonic transcriptional regulatory elements Drug discovery using chemical systems biology: weak inhibition of multiple kinases may contribute to the anti-cancer effect of nelfinavir The role of response elements organization in transcription factor selectivity: the IFN-β enhanceosome example

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Diversity and complexity in DNA recognition by transcription factors

http://www.wikidata.org/entity/Q29619632

description

2009 թուականի Յունիսին հրատարակուած գիտական յօդուած

@hyw

2009 թվականի հունիսին հրատարակված գիտական հոդված

@hy

article publié dans la revue scientifique Science

@fr

artículu científicu espublizáu en 2009

@ast

im Juni 2009 veröffentlichter wissenschaftlicher Artikel

@de

scientific article (publication date: 26 June 2009)

@en

wetenschappelijk artikel (gepubliceerd op 2009/06/26)

@nl

наукова стаття, опублікована в червні 2009

@uk

مقالة علمية (نشرت في 26-6-2009)

@ar

name

Diversity and complexity in DNA recognition by transcription factors

@ast

Diversity and complexity in DNA recognition by transcription factors

@en

type

label

Diversity and complexity in DNA recognition by transcription factors

@ast

Diversity and complexity in DNA recognition by transcription factors

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prefLabel

Diversity and complexity in DNA recognition by transcription factors

@ast

Diversity and complexity in DNA recognition by transcription factors

@en

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SCIENCE.1162327

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Diversity and complexity in DNA recognition by transcription factors

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Anastasia Vedenko

http://www.w3.org/2001/XMLSchema#string

Andrew R Gehrke

http://www.w3.org/2001/XMLSchema#string

Anthony A Philippakis

http://www.w3.org/2001/XMLSchema#string

Chi-Fong Wang

http://www.w3.org/2001/XMLSchema#string

Daniel E Newburger

http://www.w3.org/2001/XMLSchema#string

David Coburn

http://www.w3.org/2001/XMLSchema#string

Genita Metzler

http://www.w3.org/2001/XMLSchema#string

Gwenael Badis

http://www.w3.org/2001/XMLSchema#string

Hanna Kuznetsov

http://www.w3.org/2001/XMLSchema#string

Martha L Bulyk

http://www.w3.org/2001/XMLSchema#string

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HBP1: a HMG box transcriptional repressor that is targeted by the retinoblastoma family

Novel repressor of the human FMR1 gene - identification of p56 human (GCC)(n)-binding protein as a Krüppel-like transcription factor ZF5

Nucleotides of transcription factor binding sites exert interdependent effects on the binding affinities of transcription factors

TRANSFAC and its module TRANSCompel: transcriptional gene regulation in eukaryotes

Identification and cloning of TCF-1, a T lymphocyte-specific transcription factor containing a sequence-specific HMG box

UniPROBE: an online database of protein binding microarray data on protein-DNA interactions

Multiple sequence alignment with the Clustal series of programs

Explicit equilibrium modeling of transcription-factor binding and gene regulation.

Structure of the winged-helix protein hRFX1 reveals a new mode of DNA binding

Crystal structure of the Oct-1 POU domain bound to an octamer site: DNA recognition with tethered DNA-binding modules

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1720-1723

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scholarly article

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10.1126/SCIENCE.1162327

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5935

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324

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