FRT-seq: amplification-free, strand-specific transcriptome sequencing
about
The majority of total nuclear-encoded non-ribosomal RNA in a human cell is 'dark matter' un-annotated RNAA tale of three next generation sequencing platforms: comparison of Ion Torrent, Pacific Biosciences and Illumina MiSeq sequencers.Computational tools for copy number variation (CNV) detection using next-generation sequencing data: features and perspectivesCritical evaluation of imprinted gene expression by RNA-Seq: a new perspectiveBiases in Illumina transcriptome sequencing caused by random hexamer primingPregnancy-specific glycoproteins bind integrin αIIbβ3 and inhibit the platelet-fibrinogen interactionUsing genome-wide expression profiling to define gene networks relevant to the study of complex traits: from RNA integrity to network topologyProtocol dependence of sequencing-based gene expression measurementsA comparison of single molecule and amplification based sequencing of cancer transcriptomesRNA sequencing: advances, challenges and opportunitiesRapid, low-input, low-bias construction of shotgun fragment libraries by high-density in vitro transpositionPrevention, diagnosis and treatment of high-throughput sequencing data pathologies.Directional RNA-seq reveals highly complex condition-dependent transcriptomes in E. coli K12 through accurate full-length transcripts assembling.An integrative method to normalize RNA-Seq data.Deep sequencing of coding and non-coding RNA in the CNSComprehensive comparative analysis of strand-specific RNA sequencing methods.Effect of PCR extension temperature on high-throughput sequencing.The prevalence and regulation of antisense transcripts in Schizosaccharomyces pombe.A multiplex RNA-seq strategy to profile poly(A+) RNA: application to analysis of transcription response and 3' end formation.Strand-specific deep sequencing of the transcriptomeLinear amplification for deep sequencing.Whole-transcriptome RNAseq analysis from minute amount of total RNA.Bias detection and correction in RNA-Sequencing dataCleavage of rRNA ensures translational cessation in sperm at fertilization.Global analysis of trans-splicing in Drosophila.Single read and paired end mRNA-Seq Illumina libraries from 10 nanograms total RNA.Design and validation issues in RNA-seq experiments.The transcriptional landscape and small RNAs of Salmonella enterica serovar Typhimurium.Amplification-free digital gene expression profiling from minute cell quantitiesModelling and simulating generic RNA-Seq experiments with the flux simulator.Intronic RNAs constitute the major fraction of the non-coding RNA in mammalian cells.Comprehensive polyadenylation site maps in yeast and human reveal pervasive alternative polyadenylation.The impact of amplification on differential expression analyses by RNA-seqExperimental design, preprocessing, normalization and differential expression analysis of small RNA sequencing experiments.A combination of improved differential and global RNA-seq reveals pervasive transcription initiation and events in all stages of the life-cycle of functional RNAs in Propionibacterium acnes, a major contributor to wide-spread human diseaseHigh-throughput RNA sequencing of pseudomonas-infected Arabidopsis reveals hidden transcriptome complexity and novel splice variants.Quality assessment and control of tissue specific RNA-seq libraries of Drosophila transgenic RNAi models.Next-Generation Sequencing RNA-Seq Library Construction.Transfection of shRNA-encoding Minivector DNA of a few hundred base pairs to regulate gene expression in lymphoma cellsRNA-seq analysis of the influence of anaerobiosis and FNR on Shigella flexneri.
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P2860
FRT-seq: amplification-free, strand-specific transcriptome sequencing
description
2010 nî lūn-bûn
@nan
2010 թուականի Յունուարին հրատարակուած գիտական յօդուած
@hyw
2010 թվականի հունվարին հրատարակված գիտական հոդված
@hy
2010年の論文
@ja
2010年論文
@yue
2010年論文
@zh-hant
2010年論文
@zh-hk
2010年論文
@zh-mo
2010年論文
@zh-tw
2010年论文
@wuu
name
FRT-seq: amplification-free, strand-specific transcriptome sequencing
@ast
FRT-seq: amplification-free, strand-specific transcriptome sequencing
@en
FRT-seq: amplification-free, strand-specific transcriptome sequencing.
@nl
type
label
FRT-seq: amplification-free, strand-specific transcriptome sequencing
@ast
FRT-seq: amplification-free, strand-specific transcriptome sequencing
@en
FRT-seq: amplification-free, strand-specific transcriptome sequencing.
@nl
prefLabel
FRT-seq: amplification-free, strand-specific transcriptome sequencing
@ast
FRT-seq: amplification-free, strand-specific transcriptome sequencing
@en
FRT-seq: amplification-free, strand-specific transcriptome sequencing.
@nl
P2093
P2860
P356
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P1476
FRT-seq: amplification-free, strand-specific transcriptome sequencing
@en
P2093
Cordelia F Langford
Daniel J Turner
Elizabeth M Sheridan
John E Collins
Keith D James
Lira Mamanova
Peter D Ellis
Robert M Andrews
Tobias W B Ost
P2860
P2888
P304
P356
10.1038/NMETH.1417
P577
2010-01-17T00:00:00Z
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P6179
1001259801