RNA-guided RNA modification: functional organization of the archaeal H/ACA RNP - Test2 - elhamkhani - TriplyDB

RNA-guided RNA modification: functional organization of the archaeal H/ACA RNP

RNA-guided RNA modification: functional organization of the archaeal H/ACA RNP

http://www.wikidata.org/entity/Q33826941

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The coding/non-coding overlapping architecture of the gene encoding the Drosophila pseudouridine synthase An improved definition of the RNA-binding specificity of SECIS-binding protein 2, an essential component of the selenocysteine incorporation machinery hNaf1 is required for accumulation of human box H/ACA snoRNPs, scaRNPs, and telomerase SHQ1 is required prior to NAF1 for assembly of H/ACA small nucleolar and telomerase RNPs Stepwise RNP assembly at the site of H/ACA RNA transcription in human cells A computational screen for mammalian pseudouridylation guide H/ACA RNAs 2'-O-methylation of the wobble residue of elongator pre-tRNA(Met) in Haloferax volcanii is guided by a box C/D RNA containing unique features Crystal structure determination and site-directed mutagenesis of the Pyrococcus abyssi aCBF5-aNOP10 complex reveal crucial roles of the C-terminal domains of both proteins in H/ACA sRNP activity.H/ACA small nucleolar RNA pseudouridylation pockets bind substrate RNA to form three-way junctions that position the target U for modification Structure and Functional Studies of the CS Domain of the Essential H/ACA Ribonucleoparticle Assembly Protein SHQ1 Cas6 is an endoribonuclease that generates guide RNAs for invader defense in prokaryotes Structure of a functional ribonucleoprotein pseudouridine synthase bound to a substrate RNA Functional and Structural Impact of Target Uridine Substitutions on the H/ACA Ribonucleoprotein Particle Pseudouridine Synthase,Glycosidic Bond Conformation Preference Plays a Pivotal Role in Catalysis of RNA Pseudouridylation: A Combined Simulation and Structural Study Structural and functional evidence of high specificity of Cbf5 for ACA trinucleotide Structure of H/ACA RNP Protein Nhp2p Reveals Cis/Trans Isomerization of a Conserved Proline at the RNA and Nop10 Binding Interface Reconstitution and structural analysis of the yeast box H/ACA RNA-guided pseudouridine synthase Structure of the Shq1-Cbf5-Nop10-Gar1 complex and implications for H/ACA RNP biogenesis and dyskeratosis congenita Characterization of the interaction between protein Snu13p/15.5K and the Rsa1p/NUFIP factor and demonstration of its functional importance for snoRNP assembly Different mechanisms for pseudouridine formation in yeast 5S and 5.8S rRNAs.A conserved WD40 protein binds the Cajal body localization signal of scaRNP particles Structure-function relationships of archaeal Cbf5 during in vivo RNA-guided pseudouridylation.Gain and loss of an intron in a protein-coding gene in Archaea: the case of an archaeal RNA pseudouridine synthase gene.The box H/ACA ribonucleoprotein complex: interplay of RNA and protein structures in post-transcriptional RNA modification.A flexible RNA backbone within the polypyrimidine tract is required for U2AF65 binding and pre-mRNA splicing in vivo Structural study of the H/ACA snoRNP components Nop10p and the 3' hairpin of U65 snoRNA.Comparative study of two box H/ACA ribonucleoprotein pseudouridine-synthases: relation between conformational dynamics of the guide RNA, enzyme assembly and activity.Formation of the conserved pseudouridine at position 55 in archaeal tRNA Pseudouridine formation in archaeal RNAs: The case of Haloferax volcanii.Genome-wide analysis of C/D and H/ACA-like small nucleolar RNAs in Leishmania major indicates conservation among trypanosomatids in the repertoire and in their rRNA targets.Discovery of Pyrobaculum small RNA families with atypical pseudouridine guide RNA features The structure and function of small nucleolar ribonucleoproteins.Accurate placement of substrate RNA by Gar1 in H/ACA RNA-guided pseudouridylation.Identification of determinants in the protein partners aCBF5 and aNOP10 necessary for the tRNA:Psi55-synthase and RNA-guided RNA:Psi-synthase activities.RNA-guided isomerization of uridine to pseudouridine--pseudouridylation.Pseudouridine: still mysterious, but never a fake (uridine)!Kinetic and thermodynamic characterization of the reaction pathway of box H/ACA RNA-guided pseudouridine formation.How a single protein complex accommodates many different H/ACA RNAs.Combined in silico and experimental identification of the Pyrococcus abyssi H/ACA sRNAs and their target sites in ribosomal RNAs RNA pseudouridylation: new insights into an old modification

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RNA-guided RNA modification: functional organization of the archaeal H/ACA RNP

http://www.wikidata.org/entity/Q33826941

description

2005 nî lūn-bûn

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2005 թուականի Մայիսին հրատարակուած գիտական յօդուած

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2005 թվականի մայիսին հրատարակված գիտական հոդված

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2005年の論文

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2005年論文

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2005年論文

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2005年論文

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2005年論文

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2005年論文

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2005年论文

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name

RNA-guided RNA modification: functional organization of the archaeal H/ACA RNP

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RNA-guided RNA modification: functional organization of the archaeal H/ACA RNP

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type

label

RNA-guided RNA modification: functional organization of the archaeal H/ACA RNP

@ast

RNA-guided RNA modification: functional organization of the archaeal H/ACA RNP

@en

prefLabel

RNA-guided RNA modification: functional organization of the archaeal H/ACA RNP

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RNA-guided RNA modification: functional organization of the archaeal H/ACA RNP

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Genes & Development

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RNA-guided RNA modification: functional organization of the archaeal H/ACA RNP

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P2093

Daniel L Baker

http://www.w3.org/2001/XMLSchema#string

David A Dy

http://www.w3.org/2001/XMLSchema#string

Michael I R Chastkofsky

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Michael P Terns

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Osama A Youssef

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Rebecca M Terns

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P2860

Nhp2p and Nop10p are essential for the function of H/ACA snoRNPs

The family of box ACA small nucleolar RNAs is defined by an evolutionarily conserved secondary structure and ubiquitous sequence elements essential for RNA accumulation

In vitro assembly of human H/ACA small nucleolar RNPs reveals unique features of U17 and telomerase RNAs

A common core RNP structure shared between the small nucleoar box C/D RNPs and the spliceosomal U4 snRNP

X-linked dyskeratosis congenita is caused by mutations in a highly conserved gene with putative nucleolar functions

Identification of 86 candidates for small non-messenger RNAs from the archaeon Archaeoglobus fulgidus.

Noncoding RNA genes identified in AT-rich hyperthermophiles

Cajal body-specific small nuclear RNAs: a novel class of 2'-O-methylation and pseudouridylation guide RNAs

Binding of L7Ae protein to the K-turn of archaeal snoRNAs: a shared RNA binding motif for C/D and H/ACA box snoRNAs in Archaea

Architecture and assembly of mammalian H/ACA small nucleolar and telomerase ribonucleoproteins

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10.1101/GAD.1309605

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10

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19

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2005-05-03T00:00:00Z

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7868660

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15870259

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1132009

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