BioModels Database: a free, centralized database of curated, published, quantitative kinetic models of biochemical and cellular systems. - Wikidata - wikimedia - TriplyDB

BioModels Database: a free, centralized database of curated, published, quantitative kinetic models of biochemical and cellular systems.

BioModels Database: a free, centralized database of curated, published, quantitative kinetic models of biochemical and cellular systems.

http://www.wikidata.org/entity/Q25255639

about

Towards reproducible descriptions of neuronal network models.NeuroML: a language for describing data driven models of neurons and networks with a high degree of biological detail Universally sloppy parameter sensitivities in systems biology models Modelling the widespread effects of TOC1 signalling on the plant circadian clock and its outputs Condor-COPASI: high-throughput computing for biochemical networks Reproducible computational biology experiments with SED-ML--the Simulation Experiment Description Markup Language Explaining oscillations and variability in the p53-Mdm2 system MIRIAM Resources: tools to generate and resolve robust cross-references in Systems Biology BiGG: a Biochemical Genetic and Genomic knowledgebase of large scale metabolic reconstructions Feedback between p21 and reactive oxygen production is necessary for cell senescence BioModels.net Web Services, a free and integrated toolkit for computational modelling software The clock gene circuit in Arabidopsis includes a repressilator with additional feedback loops BioModels Database: An enhanced, curated and annotated resource for published quantitative kinetic models SABIO-RK--database for biochemical reaction kinetics CytoSolve: A Scalable Computational Method for Dynamic Integration of Multiple Molecular Pathway Models Chemical Entities of Biological Interest: an update Web services at the European Bioinformatics Institute-2009 Software applications for flux balance analysis Reverse engineering and identification in systems biology: strategies, perspectives and challenges Experimental and computational analysis of polyglutamine-mediated cytotoxicity Systematic integration of experimental data and models in systems biology libChEBI: an API for accessing the ChEBI database kpath: integration of metabolic pathway linked data The BioPAX community standard for pathway data sharing The promises of quantitative systems pharmacology modelling for drug development Systems Biology for Smart Crops and Agricultural Innovation: Filling the Gaps between Genotype and Phenotype for Complex Traits Linked with Robust Agricultural Productivity and Sustainability Annotation and merging of SBML models with semanticSBML OptFlux: an open-source software platform for in silico metabolic engineering Iron behaving badly: inappropriate iron chelation as a major contributor to the aetiology of vascular and other progressive inflammatory and degenerative diseases Memory switches in chemical reaction space Reconstruction and validation of RefRec: a global model for the yeast molecular interaction network.Maximum entropy reconstructions of dynamic signaling networks from quantitative proteomics data A unique transformation from ordinary differential equations to reaction networks Cycles and the qualitative evolution of chemical systems A method for comparing multivariate time series with different dimensions An improved swarm optimization for parameter estimation and biological model selection A computational model of liver iron metabolism What can we learn from global sensitivity analysis of biochemical systems?Gene duplication and phenotypic changes in the evolution of mammalian metabolic networks Comparative Analysis of Yeast Metabolic Network Models Highlights Progress, Opportunities for Metabolic Reconstruction

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P2860

BioModels Database: a free, centralized database of curated, published, quantitative kinetic models of biochemical and cellular systems.

http://www.wikidata.org/entity/Q25255639

description

2006 nî lūn-bûn

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2006 թուականի Յունուարին հրատարակուած գիտական յօդուած

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Nucleic Acids Research

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Alexander Broicher

http://www.w3.org/2001/XMLSchema#string

Benjamin Bornstein

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Bruce Shapiro

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Harish Dharuri

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Marco Donizelli

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P2283

BioModels Database

P2860

The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models

CellML: its future, present and past

Minimum information requested in the annotation of biochemical models (MIRIAM)

Web-based kinetic modelling using JWS Online.

Systems biology markup language: Level 2 and beyond.

ModelDB: making models publicly accessible to support computational neuroscience.

International alliances for quantitative modeling in systems biology.

The Database of Quantitative Cellular Signaling: management and analysis of chemical kinetic models of signaling networks.

Quantitative information management for the biochemical computation of cellular networks.

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D689-91

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258743

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10.1093/NAR/GKJ092

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Database issue

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34

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Nicolas Le Novère

Herbert M. Sauro

Maria Schilstra

Mélanie Courtot

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2006-01-01T00:00:00Z

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7389390

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16381960

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1347454

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