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STITCH: interaction networks of chemicals and proteins

STITCH: interaction networks of chemicals and proteins

http://www.wikidata.org/entity/Q28465606

about

Linked open drug data for pharmaceutical research and development Genome-environment interactions that modulate aging: powerful targets for drug discovery A systematic screen for protein-lipid interactions in Saccharomyces cerevisiae eggNOG v2.0: extending the evolutionary genealogy of genes with enhanced non-supervised orthologous groups, species and functional annotations T3DB: a comprehensively annotated database of common toxins and their targets STRING 8--a global view on proteins and their functional interactions in 630 organisms Biomarker-based drug safety assessment in the age of systems pharmacology: from foundational to regulatory science STITCH 4: integration of protein-chemical interactions with user data STITCH 2: an interaction network database for small molecules and proteins DRABAL: novel method to mine large high-throughput screening assays using Bayesian active learning The DBCLS BioHackathon: standardization and interoperability for bioinformatics web services and workflows. The DBCLS BioHackathon Consortium*Identification of novel thyroid cancer-related genes and chemicals using shortest path algorithm The Use of Chemical-Chemical Interaction and Chemical Structure to Identify New Candidate Chemicals Related to Lung Cancer Predicting biological functions of compounds based on chemical-chemical interactions Integrated bio-entity network: a system for biological knowledge discovery Predicting Anatomical Therapeutic Chemical (ATC) classification of drugs by integrating chemical-chemical interactions and similarities Predicting metabolic pathways of small molecules and enzymes based on interaction information of chemicals and proteins Predicting chemical toxicity effects based on chemical-chemical interactions Systematic prediction of pharmacodynamic drug-drug interactions through protein-protein-interaction network ChemMine tools: an online service for analyzing and clustering small molecules Identifying chemicals with potential therapy of HIV based on protein-protein and protein-chemical interaction network Prediction of cancer drugs by chemical-chemical interactions Finding candidate drugs for hepatitis C based on chemical-chemical and chemical-protein interactions Gene Ontology and KEGG Pathway Enrichment Analysis of a Drug Target-Based Classification System Identification of New Candidate Genes and Chemicals Related to Esophageal Cancer Using a Hybrid Interaction Network of Chemicals and Proteins Mining Chemical Activity Status from High-Throughput Screening Assays The Use of Gene Ontology Term and KEGG Pathway Enrichment for Analysis of Drug Half-Life DNA microarray of global transcription factor mutant reveals membrane-related proteins involved in n-butanol tolerance in Escherichia coli HerDing: herb recommendation system to treat diseases using genes and chemicals An Ebola virus-centered knowledge base Combining heterogenous data for prediction of disease related and pharmacogenes Visualization of protein interaction networks: problems and solutions.Mining the pharmacogenomics literature--a survey of the state of the art Applications of natural language processing in biodiversity science Publishing Chinese medicine knowledge as Linked Data on the Web A Systematic Framework for Drug Repositioning from Integrated Omics and Drug Phenotype Profiles Using Pathway-Drug Network DPDR-CPI, a server that predicts Drug Positioning and Drug Repositioning via Chemical-Protein Interactome An inverse small molecule screen to design a chemically defined medium supporting long-term growth of Drosophila cell lines A corpus for plant-chemical relationships in the biomedical domain Host, pathogen and environment: a bacterial gbpA gene expression study in response to magnesium environment and presence of prawn carapace and commercial chitin

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P2860

STITCH: interaction networks of chemicals and proteins

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2007 nî lūn-bûn

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2007 թուականի Դեկտեմբերին հրատարակուած գիտական յօդուած

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2007 թվականի դեկտեմբերին հրատարակված գիտական հոդված

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2007年の論文

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2007年論文

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2007年論文

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2007年論文

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2007年論文

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2007年論文

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2007年论文

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Nucleic Acids Research

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C. von Mering

http://www.w3.org/2001/XMLSchema#string

L. J. Jensen

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M. Kuhn

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P. Bork

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P2860

DrugBank: a comprehensive resource for in silico drug discovery and exploration

The Protein Data Bank

From genomics to chemical genomics: new developments in KEGG

MetaCyc: a multiorganism database of metabolic pathways and enzymes

TTD: Therapeutic Target Database

STRING: known and predicted protein-protein associations, integrated and transferred across organisms

STRING 7--recent developments in the integration and prediction of protein interactions

NCBI reference sequences (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins

Database resources of the National Center for Biotechnology Information

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10.1093/NAR/GKM795

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Database

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36

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Monica Campillos

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2007-12-23T00:00:00Z

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2238848

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