A nucleosome-guided map of transcription factor binding sites in yeast.
about
Phyloscan: locating transcription-regulating binding sites in mixed aligned and unaligned sequence dataPredicting nucleosome positions on the DNA: combining intrinsic sequence preferences and remodeler activitiesQuantitative models of the mechanisms that control genome-wide patterns of transcription factor binding during early Drosophila developmentDISCOVER: a feature-based discriminative method for motif search in complex genomesMuMoD: a Bayesian approach to detect multiple modes of protein-DNA binding from genome-wide ChIP dataMotifLab: a tools and data integration workbench for motif discovery and regulatory sequence analysis.Discovery of regulatory elements is improved by a discriminatory approach.CLARE: Cracking the LAnguage of Regulatory Elements.Probabilistic inference of transcription factor binding from multiple data sources.Nucleosome positioning from tiling microarray data.DiRE: identifying distant regulatory elements of co-expressed genes.A feature-based approach to modeling protein-DNA interactionsTranscriptional interaction-assisted identification of dynamic nucleosome positioningA data integration framework for prediction of transcription factor targets.Identifying regulatory elements in eukaryotic genomes.BayesPI - a new model to study protein-DNA interactions: a case study of condition-specific protein binding parameters for Yeast transcription factorsGenome-wide discovery of human heart enhancers.Blurring of high-resolution data shows that the effect of intrinsic nucleosome occupancy on transcription factor binding is mostly regional, not localHomotypic clusters of transcription factor binding sites are a key component of human promoters and enhancersThe value of position-specific priors in motif discovery using MEME.Genome-wide identification of calcium-response factor (CaRF) binding sites predicts a role in regulation of neuronal signaling pathwaysDrosophila ORC localizes to open chromatin and marks sites of cohesin complex loadingPrediction of nucleosome positioning based on transcription factor binding sitesFinding regulatory DNA motifs using alignment-free evolutionary conservation information.Integrating multiple evidence sources to predict transcription factor binding in the human genome.The organization of nucleosomes around splice sites.Evidence of association between nucleosome occupancy and the evolution of transcription factor binding sites in yeast.Multiple distinct stimuli increase measured nucleosome occupancy around human promotersHigh-resolution mapping studies of chromatin and gene regulatory elementsNucleosome repositioning links DNA (de)methylation and differential CTCF binding during stem cell development.ChIP-Seq data analysis: identification of protein-DNA binding sites with SISSRs peak-finderNucleosome dynamics define transcriptional enhancers.Absence of a simple code: how transcription factors read the genomeAccurate prediction of inducible transcription factor binding intensities in vivo.Cell-type specificity of ChIP-predicted transcription factor binding sitesEukaryotic transcription factor binding sites--modeling and integrative search methods.A continuous-index Bayesian hidden Markov model for prediction of nucleosome positioning in genomic DNA.Identification and computational analysis of gene regulatory elements.Transcriptional regulation in Saccharomyces cerevisiae: transcription factor regulation and function, mechanisms of initiation, and roles of activators and coactivators.The role of chromatin accessibility in directing the widespread, overlapping patterns of Drosophila transcription factor binding.
P2860
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P2860
A nucleosome-guided map of transcription factor binding sites in yeast.
description
2007 nî lūn-bûn
@nan
2007 թուականի Սեպտեմբերին հրատարակուած գիտական յօդուած
@hyw
2007 թվականի սեպտեմբերին հրատարակված գիտական հոդված
@hy
2007年の論文
@ja
2007年論文
@yue
2007年論文
@zh-hant
2007年論文
@zh-hk
2007年論文
@zh-mo
2007年論文
@zh-tw
2007年论文
@wuu
name
A nucleosome-guided map of transcription factor binding sites in yeast.
@ast
A nucleosome-guided map of transcription factor binding sites in yeast.
@en
type
label
A nucleosome-guided map of transcription factor binding sites in yeast.
@ast
A nucleosome-guided map of transcription factor binding sites in yeast.
@en
prefLabel
A nucleosome-guided map of transcription factor binding sites in yeast.
@ast
A nucleosome-guided map of transcription factor binding sites in yeast.
@en
P2093
P2860
P1476
A nucleosome-guided map of transcription factor binding sites in yeast.
@en
P2093
Alexander J Hartemink
Leelavati Narlikar
Raluca Gordân
P2860
P356
10.1371/JOURNAL.PCBI.0030215
P577
2007-09-24T00:00:00Z