Cyclization of short DNA fragments and bending fluctuations of the double helix.
about
DNA dynamics and single-molecule biologyClose encounters with DNAConcentration and length dependence of DNA looping in transcriptional regulationInterconvertible lac repressor-DNA loops revealed by single-molecule experimentsLac repressor hinge flexibility and DNA looping: single molecule kinetics by tethered particle motionFirst-principles calculation of DNA looping in tethered particle experiments.Nanoscale Nucleosome Dynamics Assessed with Time-lapse AFM.DNA looping-dependent autorepression of LEE1 P1 promoters by Ler in enteropathogenic Escherichia coli (EPEC).Biophysical characterization of DNA binding from single molecule force measurementsSequence dependence of DNA bending rigidity.Probing transient protein-mediated DNA linkages using nanoconfinement.Role of microscopic flexibility in tightly curved DNA.Probing the elastic limit of DNA bendingDNA curvature and flexibility in vitro and in vivo.Normalization of a chromosomal contact map.Gene repression by minimal lac loops in vivo.DNA topology confers sequence specificity to nonspecific architectural proteins.Temperature dependence of DNA persistence length.Poly(dA:dT)-rich DNAs are highly flexible in the context of DNA looping.A computational study of nucleosomal DNA flexibilitySpontaneous sharp bending of DNA: role of melting bubbles.In vitro selection of DNAs with an increased propensity to form small circles.Cooperative kinking at distant sites in mechanically stressed DNA.Effects of nucleoid proteins on DNA repression loop formation in Escherichia coliThe role of structural parameters in DNA cyclizationProtein-induced local DNA bends regulate global topology of recombination productsLocal selection rules that can determine specific pathways of DNA unknotting by type II DNA topoisomerases.T4 DNA ligase is more than an effective trap of cyclized dsDNAInterplay of Protein Binding Interactions, DNA Mechanics, and Entropy in DNA Looping KineticsIntrinsic curvature of DNA influences LacR-mediated loopingSequence dependence of transcription factor-mediated DNA loopingWinding single-molecule double-stranded DNA on a nanometer-sized reel.Revisiting the Anomalous Bending Elasticity of Sharply Bent DNABiological consequences of tightly bent DNA: the other life of a macromolecular celebrity.Mapping the phase diagram of the writhe of DNA nanocircles using atomistic molecular dynamics simulationsOptical measurement of mechanical forces inside short DNA loops.Kinking the double helix by bending deformationGeometry of mediating protein affects the probability of loop formation in DNAStretching and bending fluctuations of short DNA molecules.Extreme bendability of DNA less than 100 base pairs long revealed by single-molecule cyclization.
P2860
Q26999369-468C9883-9FB2-473E-901B-8C0F569FF43DQ26999396-62312561-15C6-4A81-9D65-938164A462AFQ27349246-CEC23EF8-A10C-4A0D-9ECB-F62D86E4F3EBQ28295676-31D7154B-E50E-44A2-A34A-F314CA3D6C0CQ30477690-AAAC63AF-6270-4362-BF45-822FDB9416AEQ30508525-A2763D57-6BAB-4EC5-8B66-63738BF73CD2Q33604029-359719CA-470B-4CA6-8F43-A09FF1CACE71Q33835110-7B9D2F58-49D2-4667-92C0-6159D37DA756Q34091700-26F62613-404E-4D11-A9DA-2A0CE7CF834BQ34100335-228ABC3E-0556-4B9A-A6FF-E5AFEAAE7BA5Q34171599-CEC6256B-EF95-426E-9AD7-F49E6FFA7B11Q34243185-062DBEBA-3984-47D9-B176-05CEF727ADA1Q34249692-936FE07B-D1AC-4162-BC35-BE3A5FBFFF3BQ34310423-AE35B7EC-5237-4C7D-943A-5CE8510E7FDCQ34398212-03F06EBE-C79E-4730-8785-9080F3245278Q34401505-B6F1E5C9-F0B3-4F95-840B-2B43888901FAQ34601182-C4D80C6D-777E-4F60-A49A-0343B4AE70A7Q34609298-4C6B7AD2-A14A-4279-A36D-D0E74AB17277Q35022475-08351E5B-B4FF-4F70-8B53-594CFE8251C9Q35129020-72DD9B3E-9644-44B0-BCAC-11EE6CB563F0Q35130332-23D91903-C475-4A6B-A290-58B332D824E5Q35548985-0DEB9277-BB5D-4667-88CF-B0F581733B8BQ35617260-F38DC3E2-8A73-452C-8817-C9F96537F095Q35891566-F078C38B-2F45-423B-A1E8-56AF91B6714BQ35914822-4DE158D2-A013-4CD0-9AC2-77EFB7B046DEQ35933659-977383EE-3585-4083-BF51-8E7DC801BE49Q35990871-60CA88EE-D940-4490-BD82-52B1EC702EC0Q36059494-1AE6FA7B-9C53-4153-BE68-63592EFECB23Q36066722-43CA992A-7737-4BFF-A342-67E38D09FF7EQ36175967-7B6D1397-8AAE-46B7-9E04-225280972694Q36228471-043F54F3-2E25-4A16-A949-5F916859082CQ36341461-55354AAC-50A4-4A06-8CF4-DF8902330C20Q36363476-3978DF32-2146-4BC5-99B7-067F59725036Q36395025-08824D6C-6C0C-4FCA-BC52-59F0C5721E1FQ36471398-FEC13A3D-BC99-46C5-BD01-EC027682F285Q36481391-119E9C4C-D958-4F07-9A0C-FE7FDCCFC1ABQ36509154-CF92719C-EB2C-4A63-817D-3EB1441280C5Q36510494-846F7CF9-F682-49D6-A091-B32B31F36CECQ36554331-A59FD69F-7D25-4A4F-A580-36276351EE58Q36591438-E98C0844-C5DF-4699-85D1-0BDDA5565A29
P2860
Cyclization of short DNA fragments and bending fluctuations of the double helix.
description
2005 nî lūn-bûn
@nan
2005 թուականի Ապրիլին հրատարակուած գիտական յօդուած
@hyw
2005 թվականի ապրիլին հրատարակված գիտական հոդված
@hy
2005年の論文
@ja
2005年論文
@yue
2005年論文
@zh-hant
2005年論文
@zh-hk
2005年論文
@zh-mo
2005年論文
@zh-tw
2005年论文
@wuu
name
Cyclization of short DNA fragments and bending fluctuations of the double helix.
@ast
Cyclization of short DNA fragments and bending fluctuations of the double helix.
@en
type
label
Cyclization of short DNA fragments and bending fluctuations of the double helix.
@ast
Cyclization of short DNA fragments and bending fluctuations of the double helix.
@en
prefLabel
Cyclization of short DNA fragments and bending fluctuations of the double helix.
@ast
Cyclization of short DNA fragments and bending fluctuations of the double helix.
@en
P2093
P2860
P356
P1476
Cyclization of short DNA fragments and bending fluctuations of the double helix.
@en
P2093
Alexander Vologodskii
Chaim Smith
Maria Vologodskaia
Nahum Shiffeldrim
P2860
P304
P356
10.1073/PNAS.0500983102
P407
P577
2005-04-04T00:00:00Z