Interpretation of ensembles created by multiple iterative rebuilding of macromolecular models
about
PHENIX: a comprehensive Python-based system for macromolecular structure solutionBiophysical and computational methods to analyze amino acid interaction networks in proteinsCrystallographic model validation: from diagnosis to healingEnsemble Refinement of Protein Crystal Structures: Validation and ApplicationAutomated identification of functional dynamic contact networks from X-ray crystallographyProtein structural ensembles are revealed by redefining X-ray electron density noiseTowards automated crystallographic structure refinement with phenix.refineIdentifying and Visualizing Macromolecular Flexibility in Structural BiologyIntegrative, dynamic structural biology at atomic resolution--it's about timeResidue-level global and local ensemble-ensemble comparisons of protein domains.Alternate states of proteins revealed by detailed energy landscape mappingMining electron density for functionally relevant protein polysterism in crystal structures.Resolution of structural heterogeneity in dynamic crystallography.Exploring structural variability in X-ray crystallographic models using protein local optimization by torsion-angle samplingModeling discrete heterogeneity in X-ray diffraction data by fitting multi-conformers.phenix.model_vs_data: a high-level tool for the calculation of crystallographic model and data statistics.Evidence of functional protein dynamics from X-ray crystallographic ensembles.Improved crystallographic structures using extensive combinatorial refinementDNA conformational transitions inferred from re-evaluation of m|Fo| - D|Fc| electron-density maps.Automated electron-density sampling reveals widespread conformational polymorphism in proteinsMultiscale conformational heterogeneity in staphylococcal protein a: possible determinant of functional plasticitySparse estimation for structural variability.E pluribus unum, no more: from one crystal, many conformations.Modelling dynamics in protein crystal structures by ensemble refinementMechanism of intermediate filament recognition by plakin repeat domains revealed by envoplakin targeting of vimentin.Averaged kick maps: less noise, more signal... and probably less bias.Multistart simulated annealing refinement of the crystal structure of the 70S ribosome.Protein flexibility: coordinate uncertainties and interpretation of structural differences.Flexibility and Design: Conformational Heterogeneity along the Evolutionary Trajectory of a Redesigned Ubiquitin.A knowledge-driven approach for crystallographic protein model completion.Interactive comparison and remediation of collections of macromolecular structures.Isomer activation controls stereospecificity of class I fructose-1,6-bisphosphate aldolases.Real-space refinement in PHENIX for cryo-EM and crystallographySparse Estimation for Structural VariabilityNew tools for the analysis and validation of cryo-EM maps and atomic modelsAdenosine Kinase couples sensing of cellular potassium depletion to purine metabolism
P2860
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P2860
Interpretation of ensembles created by multiple iterative rebuilding of macromolecular models
description
2007 nî lūn-bûn
@nan
2007年の論文
@ja
2007年論文
@yue
2007年論文
@zh-hant
2007年論文
@zh-hk
2007年論文
@zh-mo
2007年論文
@zh-tw
2007年论文
@wuu
2007年论文
@zh
2007年论文
@zh-cn
name
Interpretation of ensembles cr ...... lding of macromolecular models
@ast
Interpretation of ensembles cr ...... lding of macromolecular models
@en
type
label
Interpretation of ensembles cr ...... lding of macromolecular models
@ast
Interpretation of ensembles cr ...... lding of macromolecular models
@en
prefLabel
Interpretation of ensembles cr ...... lding of macromolecular models
@ast
Interpretation of ensembles cr ...... lding of macromolecular models
@en
P2093
P2860
P50
P1476
Interpretation of ensembles cr ...... lding of macromolecular models
@en
P2093
Nigel W Moriarty
Pavel V Afonine
Peter Zwart
Ralf W Grosse-Kunstleve
P2860
P304
P356
10.1107/S0907444907009791
P577
2007-04-21T00:00:00Z