Quantitative analysis of RNA-protein interactions on a massively parallel array reveals biophysical and evolutionary landscapes. - Wikidata - wikimedia - TriplyDB

Quantitative analysis of RNA-protein interactions on a massively parallel array reveals biophysical and evolutionary landscapes.

Quantitative analysis of RNA-protein interactions on a massively parallel array reveals biophysical and evolutionary landscapes.

http://www.wikidata.org/entity/Q40067843

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Advances in the characterization of RNA-binding proteins Long noncoding RNAs in cancer: mechanisms of action and technological advancements Unveiling the hidden function of long non-coding RNA by identifying its major partner-protein Elucidating the molecular architecture of adaptation via evolve and resequence experiments Specificity and nonspecificity in RNA-protein interactions High-throughput characterization of protein-RNA interactions Affinity regression predicts the recognition code of nucleic acid–binding proteins Sort-seq under the hood: implications of design choices on large-scale characterization of sequence-function relations A single-molecule view of transcription reveals convoys of RNA polymerases and multi-scale bursting.High-throughput sequencing technologies Blind tests of RNA nearest-neighbor energy prediction Distributed biotin-streptavidin transcription roadblocks for mapping cotranscriptional RNA folding.Kinetic competition during the transcription cycle results in stochastic RNA processing.New Technologies Provide Quantum Changes in the Scale, Speed, and Success of SELEX Methods and Aptamer Characterization.Protein-responsive ribozyme switches in eukaryotic cells.Long non-coding RNAs in cancer and development: where do we go from here?Enzymatic fabrication of high-density RNA arrays.Probing RNA-protein networks: biochemistry meets genomics Comprehensive analysis of RNA-protein interactions by high-throughput sequencing-RNA affinity profiling.Enzymatic combinatorial nucleoside deletion scanning mutagenesis of functional RNA.Multiple dimensions of epigenetic gene regulation in the malaria parasite Plasmodium falciparum: gene regulation via histone modifications, nucleosome positioning and nuclear architecture in P. falciparum RNA Bind-n-Seq: Measuring the Binding Affinity Landscape of RNA-Binding Proteins.Characterisation of aptamer-target interactions by branched selection and high-throughput sequencing of SELEX pools.Screening for Small-Molecule Modulators of Long Noncoding RNA-Protein Interactions Using AlphaScreen.Evolutionary comparison reveals that diverging CTCF sites are signatures of ancestral topological associating domains borders Highly Multiplexed RNA Aptamer Selection using a Microplate-based Microcolumn Device.High-throughput biochemical profiling reveals sequence determinants of dCas9 off-target binding and unbinding.Rapid RNA-ligand interaction analysis through high-information content conformational and stability landscapes.Quantitative assessment of RNA-protein interactions with high-throughput sequencing-RNA affinity profiling.Identification of significantly mutated regions across cancer types highlights a rich landscape of functional molecular alterations RNA Viruses: RNA Roles in Pathogenesis, Coreplication and Viral Load Rules of RNA specificity of hnRNP A1 revealed by global and quantitative analysis of its affinity distribution.De-repressing LncRNA-Targeted Genes to Upregulate Gene Expression: Focus on Small Molecule Therapeutics Systematic reconstruction of binding and stability landscapes of the fluorogenic aptamer spinach Technologies to probe functions and mechanisms of long noncoding RNAs.Mechanically Induced Trapping of Molecular Interactions and Its Applications.Revealing protein-lncRNA interaction Deciphering the protein-RNA recognition code: combining large-scale quantitative methods with structural biology.The contribution of the C5 protein subunit of Escherichia coli ribonuclease P to specificity for precursor tRNA is modulated by proximal 5' leader sequences.Mapping specificity landscapes of RNA-protein interactions by high throughput sequencing.

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P2860

Quantitative analysis of RNA-protein interactions on a massively parallel array reveals biophysical and evolutionary landscapes.

http://www.wikidata.org/entity/Q40067843

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2014 nî lūn-bûn

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2014年学术文章

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2014年學術文章

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Quantitative analysis of RNA-p ...... l and evolutionary landscapes.

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Quantitative analysis of RNA-p ...... l and evolutionary landscapes.

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Quantitative analysis of RNA-p ...... l and evolutionary landscapes.

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Nature Biotechnology

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Quantitative analysis of RNA-p ...... l and evolutionary landscapes.

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Curtis J Layton

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Howard Y Chang

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Jason D Buenrostro

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Michael P Snyder

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P2860

Long noncoding RNA as modular scaffold of histone modification complexes

Rapid and systematic analysis of the RNA recognition specificities of RNA-binding proteins

Insights into RNA biology from an atlas of mammalian mRNA-binding proteins

The G x U wobble base pair. A fundamental building block of RNA structure crucial to RNA function in diverse biological systems

High-fidelity gene synthesis by retrieval of sequence-verified DNA identified using high-throughput pyrosequencing

Accurate whole human genome sequencing using reversible terminator chemistry

HITS-CLIP yields genome-wide insights into brain alternative RNA processing

The complete atomic structure of the large ribosomal subunit at 2.4 A resolution

Structural basis of pyrimidine specificity in the MS2 RNA hairpin-coat-protein complex.

An epistatic ratchet constrains the direction of glucocorticoid receptor evolution

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562-568

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10.1038/NBT.2880

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6

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32

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Lauren M Chircus

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2014-04-13T00:00:00Z

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