Prediction of similarly acting cis-regulatory modules by subsequence profiling and comparative genomics in Drosophila melanogaster and D.pseudoobscura.
about
MAPPER: a search engine for the computational identification of putative transcription factor binding sites in multiple genomesComparative genome sequencing of Drosophila pseudoobscura: chromosomal, gene, and cis-element evolutionCross-species comparison significantly improves genome-wide prediction of cis-regulatory modules in DrosophilaUsing hexamers to predict cis-regulatory motifs in Drosophila.TOUCAN 2: the all-inclusive open source workbench for regulatory sequence analysis.Principal component analysis for predicting transcription-factor binding motifs from array-derived dataPervasive divergence of transcriptional gene regulation in Caenorhabditis nematodesIdentification of novel regulatory modules in dicotyledonous plants using expression data and comparative genomicsMORPH: probabilistic alignment combined with hidden Markov models of cis-regulatory modules.Detecting the limits of regulatory element conservation and divergence estimation using pairwise and multiple alignments.Statistical significance of cis-regulatory modules.DiRE: identifying distant regulatory elements of co-expressed genes.Identifying regulatory elements in eukaryotic genomes.An integrative ChIP-chip and gene expression profiling to model SMAD regulatory modules.Identifying cis-regulatory sequences by word profile similarityImogene: identification of motifs and cis-regulatory modules underlying gene co-regulation.Cis-regulatory mechanisms of gene expression in an olfactory neuron type in Caenorhabditis elegans.Simple Shared Motifs (SSM) in conserved region of promoters: a new approach to identify co-regulation patterns.EVOPRINTER, a multigenomic comparative tool for rapid identification of functionally important DNAErroneous attribution of relevant transcription factor binding sites despite successful prediction of cis-regulatory modules.Genome-wide identification of cis-regulatory motifs and modules underlying gene coregulation using statistics and phylogeny.Predicting tissue specific cis-regulatory modules in the human genome using pairs of co-occurring motifs.A survey of motif discovery methods in an integrated frameworkIdentifying transcriptional cis-regulatory modules in animal genomes.Improved accuracy of supervised CRM discovery with interpolated Markov models and cross-species comparison.Discovering transcriptional regulatory regions in Drosophila by a nonalignment method for phylogenetic footprinting.Regulatory circuit of human microRNA biogenesis.Evolution of cis-regulatory sequence and function in Diptera.Large-scale analysis of transcriptional cis-regulatory modules reveals both common features and distinct subclassesComputational discovery of cis-regulatory modules in Drosophila without prior knowledge of motifs.Compo: composite motif discovery using discrete modelsModuleMiner - improved computational detection of cis-regulatory modules: are there different modes of gene regulation in embryonic development and adult tissues?Recent computational approaches to understand gene regulation: mining gene regulation in silico.A statistical thin-tail test of predicting regulatory regions in the Drosophila genome.Drosophila DNase I footprint database: a systematic genome annotation of transcription factor binding sites in the fruitfly, Drosophila melanogaster.TFBScluster web server for the identification of mammalian composite regulatory elementsMotif-blind, genome-wide discovery of cis-regulatory modules in Drosophila and mousePolymorphisms in the cardiac sodium channel promoter displaying variant in vitro expression activity.
P2860
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P2860
Prediction of similarly acting cis-regulatory modules by subsequence profiling and comparative genomics in Drosophila melanogaster and D.pseudoobscura.
description
2004 nî lūn-bûn
@nan
2004年の論文
@ja
2004年学术文章
@wuu
2004年学术文章
@zh
2004年学术文章
@zh-cn
2004年学术文章
@zh-hans
2004年学术文章
@zh-my
2004年学术文章
@zh-sg
2004年學術文章
@yue
2004年學術文章
@zh-hant
name
Prediction of similarly acting ...... anogaster and D.pseudoobscura.
@en
Prediction of similarly acting ...... anogaster and D.pseudoobscura.
@nl
type
label
Prediction of similarly acting ...... anogaster and D.pseudoobscura.
@en
Prediction of similarly acting ...... anogaster and D.pseudoobscura.
@nl
prefLabel
Prediction of similarly acting ...... anogaster and D.pseudoobscura.
@en
Prediction of similarly acting ...... anogaster and D.pseudoobscura.
@nl
P356
P1433
P1476
Prediction of similarly acting ...... anogaster and D.pseudoobscura.
@en
P2093
Marc S Halfon
Yonatan H Grad
P304
P356
10.1093/BIOINFORMATICS/BTH320
P407
P577
2004-05-14T00:00:00Z