Protein sectors: evolutionary units of three-dimensional structure - Test2 - elhamkhani - TriplyDB

Protein sectors: evolutionary units of three-dimensional structure

Protein sectors: evolutionary units of three-dimensional structure

http://www.wikidata.org/entity/Q28256199

about

Protein 3D structure computed from evolutionary sequence variation Disentangling direct from indirect co-evolution of residues in protein alignments Loop 5-directed compounds inhibit chimeric kinesin-5 motors: implications for conserved allosteric mechanisms Direct-coupling analysis of residue coevolution captures native contacts across many protein families Exploring protein fitness landscapes by directed evolution Biophysical and computational methods to analyze amino acid interaction networks in proteins Computational prediction of protein interfaces: A review of data driven methods Principles of allosteric interactions in cell signaling Structure and dynamics of molecular networks: a novel paradigm of drug discovery: a comprehensive review Design principles underpinning the regulatory diversity of protein kinases Integrated analysis of residue coevolution and protein structure in ABC transporters Two polymorphisms facilitate differences in plasticity between two chicken major histocompatibility complex class I proteins "Fluctuograms" reveal the intermittent intra-protein communication in subtilisin Carlsberg and correlate mechanical coupling with co-evolution Identification of Amino Acids that Account for Long-Range Interactions in Two Triosephosphate Isomerases from Pathogenic Trypanosomes Allosteric Inhibition of a Zinc-Sensing Transcriptional Repressor: Insights into the Arsenic Repressor (ArsR) Family The Structure of the Tiam1 PDZ Domain/ Phospho-Syndecan1 Complex Reveals a Ligand Conformation that Modulates Protein Dynamics Somatic hypermutation maintains antibody thermodynamic stability during affinity maturation Automated identification of functional dynamic contact networks from X-ray crystallography Divergent evolution of protein conformational dynamics in dihydrofolate reductase.Importance of Hydrophobic Cavities in Allosteric Regulation of Formylglycinamide Synthetase: Insight from Xenon Trapping and Statistical Coupling Analysis Crystal Cryocooling Distorts Conformational Heterogeneity in a Model Michaelis Complex of DHFR Different contribution of conserved amino acids to the global properties of triosephosphate isomerases A novel allosteric mechanism in the cysteine peptidase cathepsin K discovered by computational methods Connecting Active-Site Loop Conformations and Catalysis in Triosephosphate Isomerase: Insights from a Rare Variation at Residue 96 in the Plasmodial Enzyme Exploitation of latent allostery enables the evolution of new modes of MAP kinase regulation Effects of Glycosylation on the Enzymatic Activity and Mechanisms of Proteases Integrative, dynamic structural biology at atomic resolution--it's about time Prediction of contact residue pairs based on co-substitution between sites in protein structures Rheostats and toggle switches for modulating protein function Sets of covariant residues modulate the activity and thermal stability of GH1 β-glucosidases Probing the activity modification space of the cysteine peptidase cathepsin K with novel allosteric modifiers Integrated analysis of residue coevolution and protein structures capture key protein sectors in HIV-1 proteins Protein sectors: statistical coupling analysis versus conservation Molecular Determinants Underlying Binding Specificities of the ABL Kinase Inhibitors: Combining Alanine Scanning of Binding Hot Spots with Network Analysis of Residue Interactions and Coevolution Hydrophobic Core Variations Provide a Structural Framework for Tyrosine Kinase Evolution and Functional Specialization Functional Sites Induce Long-Range Evolutionary Constraints in Enzymes Evolution-Based Functional Decomposition of Proteins Preservation of genetic and regulatory robustness in ancient gene duplicates of Saccharomyces cerevisiae Prediction of protein-RNA residue-base contacts using two-dimensional conditional random field with the lasso Hot spots for allosteric regulation on protein surfaces

P2860

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P2860

Protein sectors: evolutionary units of three-dimensional structure

http://www.wikidata.org/entity/Q28256199

description

2009 nî lūn-bûn

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2009 թուականի Օգոստոսին հրատարակուած գիտական յօդուած

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2009 թվականի օգոստոսին հրատարակված գիտական հոդված

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2009年の論文

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2009年論文

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2009年論文

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2009年論文

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2009年論文

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2009年論文

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2009年论文

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name

Protein sectors: evolutionary units of three-dimensional structure

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Protein sectors: evolutionary units of three-dimensional structure

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Protein sectors: evolutionary units of three-dimensional structure

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type

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Protein sectors: evolutionary units of three-dimensional structure

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Protein sectors: evolutionary units of three-dimensional structure

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Protein sectors: evolutionary units of three-dimensional structure

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Protein sectors: evolutionary units of three-dimensional structure

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Protein sectors: evolutionary units of three-dimensional structure

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Protein sectors: evolutionary units of three-dimensional structure

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J.CELL.2009.07.038

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P1476

Protein sectors: evolutionary units of three-dimensional structure

@en

P2093

Najeeb Halabi

http://www.w3.org/2001/XMLSchema#string

Olivier Rivoire

http://www.w3.org/2001/XMLSchema#string

Rama Ranganathan

http://www.w3.org/2001/XMLSchema#string

Stanislas Leibler

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P2860

PROTEIN FAMILIES AND THEIR EVOLUTION—A STRUCTURAL PERSPECTIVE

The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

Ligand-dependent dynamics and intramolecular signaling in a PDZ domain

Network of coupled promoting motions in enzyme catalysis

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

How frequent are correlated changes in families of protein sequences?

Structural coupling of SH2-kinase domains links Fes and Abl substrate recognition and kinase activation

Correlated mutations and residue contacts in proteins

Random matrix approach to cross correlations in financial data

Unexpected crucial role of residue 225 in serine proteases

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774-86

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scholarly article

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548243

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10.1016/J.CELL.2009.07.038

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4

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138

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2009-08-21T00:00:00Z

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26763570

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19703402

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protein structure

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3210731

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