Simultaneous prediction of protein folding and docking at high resolution.
about
Atomic model of the type III secretion system needlePrinciples and Overview of Sampling Methods for Modeling Macromolecular Structure and DynamicsMetal-Mediated Affinity and Orientation Specificity in a Computationally Designed Protein HomodimerComputational design of a symmetric homodimer using -strand assemblySolution and Crystallographic Structures of the Central Region of the Phosphoprotein from Human MetapneumovirusDe novo design of protein homo-oligomers with modular hydrogen-bond network-mediated specificityModeling symmetric macromolecular structures in Rosetta3On docking, scoring and assessing protein-DNA complexes in a rigid-body frameworkProtein-protein docking with F(2)Dock 2.0 and GB-rerankThe common structural architecture of Shigella flexneri and Salmonella typhimurium type three secretion needlesOne contact for every twelve residues allows robust and accurate topology-level protein structure modelingAtomic-accuracy prediction of protein loop structures through an RNA-inspired Ansatz.Structure determination of helical filaments by solid-state NMR spectroscopyInsights on the structure and stability of Licanantase: a trimeric acid-stable coiled-coil lipoprotein from Acidithiobacillus thiooxidans.Residue proximity information and protein model discrimination using saturation-suppressor mutagenesisPractically useful: what the Rosetta protein modeling suite can do for youAdvances in protein NMR provided by the NIGMS Protein Structure Initiative: impact on drug discovery.RosettaEPR: an integrated tool for protein structure determination from sparse EPR data.Alternate states of proteins revealed by detailed energy landscape mappingStructure-based prediction of methyl chemical shifts in proteins.Protein structure prediction using global optimization by basin-hopping with NMR shift restraints.Flexibility and binding affinity in protein-ligand, protein-protein and multi-component protein interactions: limitations of current computational approaches.Differential modulations of KCNQ1 by auxiliary proteins KCNE1 and KCNE2Solution conformation and dynamics of the HIV-1 integrase core domain.Protein docking prediction using predicted protein-protein interface.High-resolution structure of the Shigella type-III secretion needle by solid-state NMR and cryo-electron microscopy.Determination of the structures of symmetric protein oligomers from NMR chemical shifts and residual dipolar couplings.Four small puzzles that Rosetta doesn't solve.Comprehensive computational design of mCreI homing endonuclease cleavage specificity for genome engineering.The NMR-Rosetta capsid model of M13 bacteriophage reveals a quadrupled hydrophobic packing epitope.Efficient incorporation of protein flexibility and dynamics into molecular docking simulationsRosetta comparative modeling for library design: Engineering alternative inducer specificity in a transcription factor.A Framework to Simplify Combined Sampling Strategies in RosettaDe Novo Proteins with Life-Sustaining Functions Are Structurally DynamicEvolutionary-guided de novo structure prediction of self-associated transmembrane helical proteins with near-atomic accuracy.Structure and biophysics of type III secretion in bacteriaTransient HIV-1 Gag-protease interactions revealed by paramagnetic NMR suggest origins of compensatory drug resistance mutations.Challenges and advances in computational docking: 2009 in review.Rosetta Broker for membrane protein structure prediction: concentrative nucleoside transporter 3 and corticotropin-releasing factor receptor 1 test cases.Mutational scanning reveals the determinants of protein insertion and association energetics in the plasma membrane.
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P2860
Simultaneous prediction of protein folding and docking at high resolution.
description
article científic
@ca
article scientifique
@fr
articolo scientifico
@it
artigo científico
@pt
bilimsel makale
@tr
scientific article published on 28 October 2009
@en
vedecký článok
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vetenskaplig artikel
@sv
videnskabelig artikel
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vědecký článek
@cs
name
Simultaneous prediction of protein folding and docking at high resolution.
@en
Simultaneous prediction of protein folding and docking at high resolution.
@nl
type
label
Simultaneous prediction of protein folding and docking at high resolution.
@en
Simultaneous prediction of protein folding and docking at high resolution.
@nl
prefLabel
Simultaneous prediction of protein folding and docking at high resolution.
@en
Simultaneous prediction of protein folding and docking at high resolution.
@nl
P2093
P2860
P50
P356
P1476
Simultaneous prediction of protein folding and docking at high resolution.
@en
P2093
Sonal Bansal
Thomas Szyperski
P2860
P304
18978-18983
P356
10.1073/PNAS.0904407106
P407
P577
2009-10-28T00:00:00Z